Literature DB >> 33914511

Faster Surface Ligation Reactions Improve Immobilized Enzyme Structure and Activity.

Andres F Chaparro Sosa1, Riley M Bednar2, Ryan A Mehl2, Daniel K Schwartz1, Joel L Kaar1.   

Abstract

During integration into materials, the inactivation of enzymes as a result of their interaction with nanometer size denaturing "hotspots" on surfaces represents a critical challenge. This challenge, which has received far less attention than improving the long-term stability of enzymes, may be overcome by limiting the exploration of surfaces by enzymes. One way this may be accomplished is through increasing the rate constant of the surface ligation reaction and thus the probability of immobilization with reactive surface sites (i.e., ligation efficiency). Here, the connection between ligation reaction efficiency and the retention of enzyme structure and activity was investigated by leveraging the extremely fast reaction of strained trans-cyclooctene (sTCOs) and tetrazines (Tet). Remarkably, upon immobilization via Tet-sTCO chemistry, carbonic anhydrase (CA) retained 77% of its solution-phase activity, while immobilization via less efficient reaction chemistries, such as thiol-maleimide and azide-dibenzocyclooctyne, led to activity retention of only 46% and 27%, respectively. Dynamic single-molecule fluorescence tracking methods further revealed that longer surface search distances prior to immobilization (>0.5 μm) dramatically increased the probability of CA unfolding. Notably, the CA distance to immobilization was significantly reduced through the use of Tet-sTCO chemistry, which correlated with the increased retention of structure and activity of immobilized CA compared to the use of slower ligation chemistries. These findings provide an unprecedented insight into the role of ligation reaction efficiency in mediating the exploration of denaturing hotspots on surfaces by enzymes, which, in turn, may have major ramifications in the creation of functional biohybrid materials.

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Year:  2021        PMID: 33914511      PMCID: PMC8574164          DOI: 10.1021/jacs.1c02375

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  42 in total

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2.  Polyelectrolyte Multilayers Enhance the Dry Storage and pH Stability of Physically Entrapped Enzymes.

Authors:  Daniel F Kienle; Andres F Chaparro Sosa; Joel L Kaar; Daniel K Schwartz
Journal:  ACS Appl Mater Interfaces       Date:  2020-05-11       Impact factor: 9.229

3.  Single-molecule FRET methods to study the dynamics of proteins at work.

Authors:  Hisham Mazal; Gilad Haran
Journal:  Curr Opin Biomed Eng       Date:  2019-08-23

4.  Correlating Structural and Functional Heterogeneity of Immobilized Enzymes.

Authors:  Daniel F Kienle; Rebecca M Falatach; Joel L Kaar; Daniel K Schwartz
Journal:  ACS Nano       Date:  2018-08-06       Impact factor: 15.881

5.  Effect of disease-linked mutations on the structure, function, stability and aggregation of human carbonic anhydrase II.

Authors:  Preeti Gupta; Pardeep Mahlawat; Shashank Deep
Journal:  Int J Biol Macromol       Date:  2019-11-25       Impact factor: 6.953

6.  Influence of Oligonucleotide Grafting Density on Surface-Mediated DNA Transport and Hybridization.

Authors:  Jeremiah C Traeger; Zachary Lamberty; Daniel K Schwartz
Journal:  ACS Nano       Date:  2019-06-25       Impact factor: 15.881

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Authors:  David S Bull; Daniel F Kienle; Andres F Chaparro Sosa; Nathaniel Nelson; Shambojit Roy; Jennifer N Cha; Daniel K Schwartz; Joel L Kaar; Andrew P Goodwin
Journal:  J Phys Chem Lett       Date:  2019-05-08       Impact factor: 6.475

8.  Ideal Bioorthogonal Reactions Using A Site-Specifically Encoded Tetrazine Amino Acid.

Authors:  Robert J Blizzard; Dakota R Backus; Wes Brown; Christopher G Bazewicz; Yi Li; Ryan A Mehl
Journal:  J Am Chem Soc       Date:  2015-08-10       Impact factor: 15.419

9.  Organometallic palladium reagents for cysteine bioconjugation.

Authors:  Ekaterina V Vinogradova; Chi Zhang; Alexander M Spokoyny; Bradley L Pentelute; Stephen L Buchwald
Journal:  Nature       Date:  2015-10-29       Impact factor: 49.962

10.  Mechanisms of surface-mediated DNA hybridization.

Authors:  Jon H Monserud; Daniel K Schwartz
Journal:  ACS Nano       Date:  2014-04-10       Impact factor: 15.881

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  3 in total

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Journal:  Sci Adv       Date:  2022-05-06       Impact factor: 14.957

2.  Gigavalent Display of Proteins on Monodisperse Polyacrylamide Hydrogels as a Versatile Modular Platform for Functional Assays and Protein Engineering.

Authors:  Thomas Fryer; Joel David Rogers; Christopher Mellor; Timo N Kohler; Ralph Minter; Florian Hollfelder
Journal:  ACS Cent Sci       Date:  2022-08-01       Impact factor: 18.728

3.  Intraparticle Kinetics Unveil Crowding and Enzyme Distribution Effects on the Performance of Cofactor-Dependent Heterogeneous Biocatalysts.

Authors:  Eleftheria Diamanti; Javier Santiago-Arcos; Daniel Grajales-Hernández; Nicolette Czarnievicz; Natalia Comino; Irantzu Llarena; Desiré Di Silvio; Aitziber L Cortajarena; Fernando López-Gallego
Journal:  ACS Catal       Date:  2021-12-01       Impact factor: 13.084

  3 in total

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