| Literature DB >> 33905054 |
David Capper1,2, David Kaul3,4, Katja Bender5, Eilís Perez1, Mihaela Chirica1,2, Julia Onken2,6, Johannes Kahn7, Winfried Brenner2,8, Felix Ehret5, Philipp Euskirchen2,9, Arend Koch1.
Abstract
PURPOSE: High-grade astrocytoma with piloid features (HGAP) is a recently described brain tumor entity defined by a specific DNA methylation profile. HGAP has been proposed to be integrated in the upcoming World Health Organization classification of central nervous system tumors expected in 2021. In this series, we present the first single-center experience with this new entity.Entities:
Keywords: Anaplastic astrocytoma with piloid features; Case series; HGAP; High-grade astrocytoma with piloid features; MC AAP; Methylation-based classification
Mesh:
Substances:
Year: 2021 PMID: 33905054 PMCID: PMC8131327 DOI: 10.1007/s11060-021-03749-z
Source DB: PubMed Journal: J Neurooncol ISSN: 0167-594X Impact factor: 4.130
Characteristics of six patients with high grade astrocytoma with piloid features
| Patient no | Sex/Age | Pathology | Tumor location | Surgery | RT (Gy) | CTx | Postoperative KPS (%) | PFS (m) | OS (m) |
|---|---|---|---|---|---|---|---|---|---|
| 1 | Male/71 | MC HGAP (score 0.99); CDKN2A/B deletion, ATRX loss, FGFR1 complex structural alteration, IDH wild-type, No EGFR amplification, MGMT unmethylated | Spinal cord (T12) | STR → GTR | 50.4 Gy | Adjuvant TMZ (4 cycles after re-resection) | 60 | 3.6 | Alive at last follow-up, 14.6 months after primary surgery |
| 2 | Female/49 | MC HGAP (score 0.98); CDKN2A/B deletion, ATRX loss, IDH1 R132H negative, No EGFR amplification, MGMT unmethylated | Pons—right cerebellar peduncle | Stereotactic biopsy | 54 Gy | Concomitant TMZ + adjuvant TMZ (4 cycles), followed by PCV protocol | 60 | 7.6 | 9.1 |
| 3 | Male/67 | MC HGAP (score 0.96); CDKN2A/B deletion, ATRX loss, IDH wild-type, No EGFR amplification, MGMT unmethylated | Spinal cord (T2–T5) | STR | n/a | n/a | n/a | n/a | n/a |
| 4 | Male/53 | MC HGAP (score 0.61); CDKN2A/B deletion, ATRX retained, IDH wild-type, No EGFR amplification, H3F3A wild-type, BRAF V600 wild-type, MGMT methylated | Brainstem | STR | 54 Gy | No | 70 | n/a | 18.6 |
| 5 | Male/47 | MC HGAP (score 0.85); NF1 syndrome, CDKN2A/B deletion, ATRX loss, No EGFR amplification, MGMT unmethylated | Mesencephalon—diencephalon | Stereotactic biopsy | No | No | 90 | n/a | 1.8 |
| 6 | Male/44 | MC HGAP (score 0.58); NF1 syndrome, CDKN2A/B deletion, ATRX retained, IDH1 R132H negative, No EGFR amplification, H3 K27M negative, BRAF V600 wild-type, MGMT methylated | Right parieto-occipital cerebrum | STR → STR | 59.2 Gy | Concomitant TMZ + adjuvant TMZ (2 cycles), followed by binimetinib (3 cycles) | 70 | 5.4 | 14.8 |
ATRX alpha thalassemia/mental retardation syndrome X-linked, BRAF B-Raf proto-oncogene, CDKN2A cyclin-dependent kinase inhibitor 2A, CTx chemotherapy, FGFR1 fibroblast growth factor receptor 1, GTR gross total resection, Gy Gray, H3F3A H3 histone family member 3A, IDH isocitrate dehydrogenase, KPS Karnofsky performance score, m months, MC HGAP methylation class high grade astrocytoma with plioid features, MGMT O6-methylguanine-DNA-methyltransferase, n/a not available, OS overall survival, NF-1 neurofibromatosis type 1, PCV procarbazine, lomustine, vincristine, PFS progression-free survival, RT radiotherapy, STR subtotal resection, T thoracic vertebra, TMZ temozolomide
Fig. 1T-SNE analysis of DNA methylation data of the six high-grade astrocytomas with piloid features (HGAP) of this series together with a reference cohort of 11 different molecular tumor classes (n = 616) [2]. The six cases clearly group together with the reference cohort of HGAP. Reference methylation classes: HGAP High-grade astrocytoma with piloid features (16 cases); DLGNT diffuse leptomeningeal glioneuronal tumor (6 cases); DMG K27 diffuse midline glioma, H3 K27M mutant (78 cases); GBM G34 glioblastoma, IDH wild-type, H3 G34 mutant (41 cases); GBM MES glioblastoma, IDH wild-type, subclass mesenchymal (56 cases); GBM RTK I glioblastoma, IDH wild-type, subclass RTK I (64 cases); GBM RTK II glioblastoma IDH wild-type, subclass RTK II (138 cases); LGG PA GG ST low-grade glioma, subclass hemispheric pilocytic astrocytoma and ganglioglioma (24 cases); LGG PA MID low-grade glioma, subclass midline pilocytic astrocytoma (38 cases); LGG PA PF low-grade glioma, subclass posterior fossa pilocytic astrocytoma (114 cases); PXA (anaplastic) pleomorphic xanthoastrocytoma (35 cases)
Fig. 2Hematoxylin–eosin stainings and copy number plots. Patient 1 Hematoxylin–eosin staining revealed low cell density astroglial tumor without marked proliferation. Genome-wide DNA methylation analysis: HGAP (score: 0.99), copy number analysis demonstrated homozygous CDKN2A/B deletion and a complex structural rearrangement of the FGFR1 locus, possibly indicating a gene fusion. The MGMT promoter was non-methylated. Patient 2 Hematoxylin–eosin staining revealed a moderately cell dense, pleomorphic glial tumor without necrosis, vascular proliferation or marked mitotic activity. The Ki67 proliferation index was focally up to 5% and a nuclear ATRX loss was noted. DNA methylation profiling revealed an HGAP (score: 0.98). Copy number analysis demonstrated homozygous CDKN2A/B deletion. MGMT promoter was non-methylated. Patient 3 Hematoxylin–eosin staining revealed a low to moderately cell rich, moderately pleomorphic glial tumor with vascular proliferation. Necrosis or mitotic activity was not observed. Ki67 proliferation index was 5–10% and a nuclear ATRX loss was noted. DNA methylation profiling revealed the diagnosis of an HGAP (score: 0.96). Copy number analysis demonstrated homozygous CDKN2A/B deletion. MGMT promoter was non-methylated. Patient 4 Hematoxylin–eosin staining revealed a moderately cell rich, moderately pleomorphic glial tumor without vascular proliferation, necrosis or mitotic activity. The Ki67 proliferation index was focally up to 5% and ATRX was retained. The DNA methylation profile was not classifiable but showed the highest classifier score for HGAP (score: 0.61). Copy number analysis demonstrated homozygous CDKN2A/B deletion. The MGMT promoter was methylated. The tumor was IDH 1/2, H3F3A and BRAF V600 wild-type. Patient 5 Hematoxylin–eosin staining a moderately cell rich, moderately pleomorphic glial tumor without vascular proliferation, necrosis or mitotic activity. The Ki67 proliferation index was 5% and nuclear ATRX was lost. Genome-wide DNA methylation analysis confirmed the diagnosis of an HGAP (score: 0.85). Copy number analysis demonstrated homozygous CDKN2A/B deletion. The MGMT promoter was non-methylated. Patient 6 Hematoxylin–eosin staining revealed a moderately cell rich, malignant glial tumor with vascular proliferation, necrosis, mitotic activity and vascular thrombi. The Ki67 proliferation index was 10% to 15% and ATRX was retained. The DNA methylation profile was not classifiable but showed the highest classifier score for HGAP (score: 0.58). Copy number analysis demonstrated homozygous CDKN2A/B deletion. The MGMT promoter was methylated. The tumor was IDH 1/2, H3F3A and BRAF V600 wild-type. CDKN2A/B cyclin-dependent kinase inhibitor 2A/B, FGFR1 fibroblast growth factor receptor 1
Fig. 3Clinical course of six patients with high-grade astrocytoma with piloid features including pre-operative MRI (A–L) and O-(2-[18F]fluoroethyl)-l-tyrosine positron emission tomography (FET-PET) (C). FS fat saturation, Gd Gadolinium, Gy Gray, MPRAGE magnetization prepared rapid gradient echo, MRI magnetic resonance imaging, PCV procarbazine, lomustine, and vincristine, FET O-(2-[18F]fluoroethyl)-l-tyrosine, PET positron emission tomography, PFS progression-free survival, OS overall survival, RCTx radiochemotherapy, RT radiotherapy, STR subtotal resection, T thoracic vertebra, T1w T1 weighted image, T2w T2 weighted image, TMZ temozolomide
MRI features of six pre-surgical HGAP cases
| Case no | Size (max. diameter) | MRI T2w | MRI T1w | Enhancement T1w Gd | DWI | Texture | Margins | Surround-ing edema | Cysts/Necrosis | Remarks | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| T1w Gd | T2w | ||||||||||
| 1 | 30 × 11 mm | Hyperintense | Hypo-/isointense | Tumor rim enhancement with a lack of central enhancement | n/a | Inhomogeneous | Inhomogeneous | Sharp | Yes | No | |
| 2 | 30 × 13 mm | Hyperintense | Hypo-/isointense | Mild patchy contrast enhancement | No restriction | Inhomogeneous | Inhomogeneous | Diffuse infiltrating | Yes | No | Increased tracer uptake in FET-PET |
| 3 | 51 × 9 mm | Hyperintense | Hypo-/isointense | Tumor rim enhancement with a lack of central enhancement | n/a | Inhomogeneous | Homogenous | Sharp | Yes | No | |
| 4 | 18 × 16 mm | Hyperintense | Hypo-/isointense | No Gd applied | n/a | Homogenous | Homogenous | Sharp | No | No | |
| 5 | 63 × 42 mm | Hyperintense with centrally hypointense parts | Hypo-/isointense | Patchy contrast enhancement | No restriction | Inhomogeneous | Inhomogeneous | Diffuse infiltrating | No | No | Cochlear implant artifact |
| 6 | 37 × 52 mm | Primarily hyperintense | Hypo-/isointense | Tumor rim enhancement with a lack of central enhancement | No restriction | Inhomogeneous | Inhomogeneous | Sharp | Yes | Necrosis | Increased tracer uptake in FET-PET |
HGAP high grade astrocytoma with piloid features, MRI magnetic resonance imaging, Gd gadolinium, n native, FET O-(2-[18F]fluoroethyl)-l-tyrosine, PET positron emission tomography