Literature DB >> 33904715

Proximity Histidine Labeling by Umpolung Strategy Using Singlet Oxygen.

Keita Nakane1, Shinichi Sato1,2, Tatsuya Niwa3, Michihiko Tsushima4, Shusuke Tomoshige1, Hideki Taguchi3, Minoru Ishikawa1, Hiroyuki Nakamura4.   

Abstract

While electrophilic reagents for histidine labeling have been developed, we report an umpolung strategy for histidine functionalization. A nucleophilic small molecule, 1-methyl-4-arylurazole, selectively labeled histidine under singlet oxygen (1O2) generation conditions. Rapid histidine labeling can be applied for instant protein labeling. Utilizing the short diffusion distance of 1O2 and a technique to localize the 1O2 generator, a photocatalyst in close proximity to the ligand-binding site, we demonstrated antibody Fc-selective labeling on magnetic beads functionalized with a ruthenium photocatalyst and Fc ligand, ApA. Three histidine residues located around the ApA binding site were identified as labeling sites by liquid chromatography-mass spectrometry analysis. This result suggests that 1O2-mediated histidine labeling can be applied to a proximity labeling reaction on the nanometer scale.

Entities:  

Year:  2021        PMID: 33904715     DOI: 10.1021/jacs.1c01626

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

Review 1.  Photoaffinity labelling strategies for mapping the small molecule-protein interactome.

Authors:  Nikolas R Burton; Phillip Kim; Keriann M Backus
Journal:  Org Biomol Chem       Date:  2021-09-22       Impact factor: 3.890

2.  Histidine-specific bioconjugation via visible-light-promoted thioacetal activation.

Authors:  Chuan Wan; Yuena Wang; Chenshan Lian; Qi Chang; Yuhao An; Jiean Chen; Jinming Sun; Zhanfeng Hou; Dongyan Yang; Xiaochun Guo; Feng Yin; Rui Wang; Zigang Li
Journal:  Chem Sci       Date:  2022-06-27       Impact factor: 9.969

3.  Controlling synthetic membraneless organelles by a red-light-dependent singlet oxygen-generating protein.

Authors:  Manjia Li; Byung Min Park; Xin Dai; Yingjie Xu; Jinqing Huang; Fei Sun
Journal:  Nat Commun       Date:  2022-06-09       Impact factor: 17.694

4.  Luminol anchors improve the electrochemical-tyrosine-click labelling of proteins.

Authors:  Sébastien Depienne; Dimitri Alvarez-Dorta; Mikael Croyal; Ranil C T Temgoua; Cathy Charlier; David Deniaud; Mathieu Mével; Mohammed Boujtita; Sébastien G Gouin
Journal:  Chem Sci       Date:  2021-11-10       Impact factor: 9.825

Review 5.  Umpolung strategies for the functionalization of peptides and proteins.

Authors:  Andrew M White; Isabella R Palombi; Lara R Malins
Journal:  Chem Sci       Date:  2022-02-02       Impact factor: 9.825

6.  Molecular Spatiomics by Proximity Labeling.

Authors:  Myeong-Gyun Kang; Hyun-Woo Rhee
Journal:  Acc Chem Res       Date:  2022-05-05       Impact factor: 24.466

7.  Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

Authors:  Yansheng Zhai; Xiaoyan Huang; Keren Zhang; Yuchen Huang; Yanlong Jiang; Jingwei Cui; Zhe Zhang; Cookson K C Chiu; Weiye Zhong; Gang Li
Journal:  Nat Commun       Date:  2022-08-20       Impact factor: 17.694

Review 8.  Exporting Homogeneous Transition Metal Catalysts to Biological Habitats.

Authors:  Andrés Seoane; José Luis Mascareñas
Journal:  European J Org Chem       Date:  2022-05-12

9.  Switching of Photocatalytic Tyrosine/Histidine Labeling and Application to Photocatalytic Proximity Labeling.

Authors:  Keita Nakane; Haruto Nagasawa; Chizu Fujimura; Eri Koyanagi; Shusuke Tomoshige; Minoru Ishikawa; Shinichi Sato
Journal:  Int J Mol Sci       Date:  2022-10-02       Impact factor: 6.208

10.  An overview of chemo- and site-selectivity aspects in the chemical conjugation of proteins.

Authors:  Charlotte Sornay; Valentine Vaur; Alain Wagner; Guilhem Chaubet
Journal:  R Soc Open Sci       Date:  2022-01-26       Impact factor: 2.963

  10 in total

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