Literature DB >> 33902719

Genome sequence of Epibacterium ulvae strain DSM 24752T, an indigoidine-producing, macroalga-associated member of the marine Roseobacter group.

Sven Breider1, Shama Sehar2, Martine Berger1, Torsten Thomas2, Thorsten Brinkhoff1, Suhelen Egan3.   

Abstract

Strain U95T (= DSM 24752T = LMG 26464T) is the type strain of Epibacterium ulvae, which is the type species of the genus Epibacterium. This genus belongs to the marine Roseobacter group. E. ulvae Strain U95T was isolated from the macroalga Ulva australis, is Gram-negative, rod-shaped and motile. Here we describe the permanent draft genome sequence and annotation of E. ulvae U95T with a focus on secondary metabolite production and interaction with its host. The genome contains 4,092,893 bp, 3977 protein-coding genes and 60 RNA genes. The genome encodes a gene cluster for synthesis of the blue-pigmented secondary metabolite indigoidine and contains several genes for adhesion mechanisms, putative bacteriocin, siderophores, a type VI secretion system, and enzymes that confer oxidative stress resistance. Combined, these features may aid in the successful colonization and persistence of E. ulvae on host surfaces and in competition with the surrounding microbial consortium.

Entities:  

Keywords:  Biofilm; Indigoidine; Roseobacter group bacteria; Siderophore; α- proteobacteria

Year:  2019        PMID: 33902719     DOI: 10.1186/s40793-019-0343-5

Source DB:  PubMed          Journal:  Environ Microbiome        ISSN: 2524-6372


  51 in total

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