| Literature DB >> 33897625 |
Abstract
With modernization of safety standards for microbiology outreach teaching laboratories, ethical challenges arise in teaching microbiology for the public good without short-changing students in under-resourced situations, or when institutional support is subpar. Still, educators want students to engage using applied skills for inquiry, research-based microbial learning activities - safely. Following several United States microbial outbreaks, federal investigation traced sources back to teaching laboratories. Policy discussions ensued. The American Society for Microbiology (ASM) Task Force provides recommended but not mandated guidelines; however, guidelines are not amenable by all. Here, a real-world, ethical scenario of a university-level outreach microbiology laboratory course hosted at several locations provides context for under-resourced challenges in safety compliance. In this example of biomedical and public health ethical considerations, upper administration puts the onus on instructors to assure safe labs for their students and the general public. Temporarily hired instructors without curriculum or sufficient institutional support are put in precarious positions with often egregious practices to get the job done. This scenario is examined with different public health ethical frameworks and principles: non-maleficence, beneficence, health maximization, efficiency of policy regulations, respect for institutional and instructor autonomy, justice, and proportionality balancing stakeholder concerns. Sample curricular strategies are employed to mitigate these challenges. Taking a utilitarianism framework of the greatest good for the most benefit, this paper advocates for social justice supporting access to education as a moral duty. Administrations should ensure instructors are supported sufficiently to provide safe, authentic learning experiences. Solutions for under-resourced outreach teaching are needed for public trust.Entities:
Keywords: curriculum; equity; ethics; laboratory; outbreak; policy; risk; safety
Year: 2021 PMID: 33897625 PMCID: PMC8060768 DOI: 10.3389/fmicb.2021.589569
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
Sample University X under-resourced teaching laboratory scenario.
| Real-world scenarios | Challenge | Under-resourced responses, solutions, and persistent remaining challenges |
|---|---|---|
University X, a United States-based, originally brick-and-mortar institution teaches university courses at globally-located sites in host countries and online. Serves a diversity of underrepresented and lower SES students, providing a valuable education and next step. Provides STEM core courses for credentials. | Unique settings present challenges for different science laboratory courses – particularly microbiology. Mission to keep tuition low creates culture of scarcity. Need to assure courses are sustained for STEM pipeline discoveries, innovations, health and economic growth with adequate numbers of research and public health professionals. | Unique solutions to daily challenges are sought. Some solutions employed are not within guidelines. Less costly supervisory roles lack safety-trained leadership. Mandates and guidelines may be ignored if not enforceable, yet puts greater moral burden and culpability on instructors. |
United States Occupational Safety and Health Act of 1970 (OSH Act, 2011). Institution provided laboratory courses practices common to most institutions until 1990 OSHA Laboratory Standard regulations for safety education requires protection for employees from hazards causing serious harm. Regulations specify Chemical Hygiene Officer, written Chemical Hygiene Plans, and generally a biosafety officer. University X neither kept up, nor meets OSHA regulations; faculty and OSHA-trained students recognize breaches; faculty risk-takers have higher tolerance for poor compliance; students grateful for education are less likely to report complaints. Administration lacking trained guidance makes top-down, unilateral decisions directly impacting educational safety standards: cuts online microbiology laboratory courses, allows other coursework to continue without safety oversight, and remains in violation of biomedical ethical standards in many host countries abroad for non-compliant storage, transport, access, and use of chemical and biological materials. Institutional policies to inform faculty and provide training support lack leadership. Those with more knowledge hold greater responsibility and culpability if an accidental exposure and/or outbreak occurred without power to address the issues. Internal and external whistleblowing is a response as a consequence of a failed action. | Institutional non-compliance. Inability to keep up with safety changes without allocated resources and leadership. Exempted or non-compliant from mandates e.g., education contracted on military bases with exemptions, online education, or by negligence. Administrative decision-making by Dean and Academic Coordinators under the approval of the top administration is flawed without consultation with experts and solutions. Responsibility, culpability, and autonomy are complex. | Administration seeks steps to compliance: - OSHA Administration hires support staff. Provide faculty training and safety officer assistance. Accessible resources: - updated ( - Special teaching laboratory environment ( - ASM resources. - International recommendations World Health Organization ( - Online resources ( - Biosafety Level (BSL) criteria for risk assessment learned through Center for Disease Control (CDC) training. - National Research Council guidelines for chemicals ( Policy change can support faculty with safe compliant, low-cost, curricula meeting educational competency needs and retaining courses. |
Laboratory courses are held wherever space is available. Faculty drive to each site with supplies to set up the “lab” before class (in variable settings), teach lecture and lab, break it down, clean, dispose waste to move back to a storage area or their own homes. An advertisement depicting a remote area boldly claims “ Without safe disposal, microbial waste is sewaged, dissected formalin-preserved specimens (from Anatomy course) put in woodchippers to “hide” waste in trash. | Outreach sites struggle with additional challenges to meet guideline compliance. With no storage in shared spaces, microbial plates are put in incubation tubs labeled “do not touch” left at “room temp” in a public office space, or personal vehicle. Diverse locations lack space for storage, sample incubation, or cleaning. Without areas to autoclave waste, everything must be cleared for immediate disposal or safe transport. | Meet logistical challenges through community effort to collectively design and provide safe curricula for different outreach settings not meeting guidelines. Attempt to collectively generate ideas. One-day experiments without stored incubation. Pressure cooker instead of autoclave or bring waste to hospital. |
Faculty are temporarily hired, may have limited training in microbiology, little practical skill, nor aware of ASM resources or safety guidelines. With lack of guidance, institution remains unaware of current standards. Administration puts the onus on instructors to assure safe laboratory courses with assumptions that temporarily hired instructors have basic knowledge to teach the course. Those coming from well-supported institutions struggle with low resources and do not recognize unintended consequences of stringent guidelines. Faculty relying on older traditional methods are not familiar with current guidelines. Under-resourced faculty experience isolation. Without a supported lab manual curriculum, or institutional safety officer, faculty are sole decision-makers. Sole safety-aware science instructor (microbiologist) may become the lone voice seeking institutional change. Frustration mounts when the institution lacks safety officer to support faculty or designate faculty member as biosafety leader without training or credentials. Hierarchy designates safety officers to bear the burden of liability, but places a higher burden on the instructor resulting in fears of liability, culpability, or guilt if an accident or near miss occurs. Embarrassment identifying with an institution blinded more by finances than by safety. Might not publish without compliance or fear of public exposure. | Lacking preparation and with a knowledge gap in where to find resources, guidelines, or curricula, faculty rely on their prior knowledge; older methods of isolation from environmental sources are practiced. Without stock cultures, yogurt provides the easiest source, but new temporary faculty step into the position (sometimes with less than 2 weeks to prepare) with the same challenge not knowing where to begin. Isolation keeps under-resourced faculty from finding assistance. Fear hampers reaching out With questionable institutional practices, not only is safety a concern but also culpability when compliance is not met. When the institution lacking safety measures does not require (or even allow) faculty publishing, then raises an ethical concern of justice. | Trained mentor or administrator provides orientation packet of resources with safety training and curricular ideas attempts to address gaps faculty face. However, with set syllabi and curricula, this results in the risk of lost autonomy in curricular decisions. Community of educators provides support. |
Without a curriculum, a biosafety officer or suggestions to get started, faculty relies on what is “on hand” and think outside the box. Piecemeal lab kits putting faculty in precarious positions often with egregious practices to get the job done. With sparsely allocated resources of funds, time, and staff to minimally address chemicals, PPE and biological waste disposal, the pros and cons of stringent guidelines yield different forms of harm. | Challenges meeting ASM curricular learning outcomes | Those with knowledge can use open-source resources indicate curricula for under-resourced needs: - ASM guidelines. - ASM resource curricula. - Course Source. |
Instructors not receiving laboratory supplies, purchase materials, and transport laboratory grade chemicals in personal vehicles, sometimes across international borders. Lacking supplies, storage, safety training, etc., a laboratory kit pieced together supports several standard lab exercises. Instructors acquaint themselves with available supplies. Since no laboratory manual curriculum is available, they make due to provide a laboratory course. Faculty bringing sheep brains from farms (for Anatomy course use) were discouraged from doing (potential prion disease). Faculty working jointly in clinics bringing clinical isolates from hospital patient cases were discouraged from doing so (pathogens). | Logistics of transport, shipping, labeling, and storing supplies must be considered at every level for safety beyond home regulations. Lacking standardized training, supplies, and curricular resources, a trained safety officer or administrator could provide safe solutions. Creative solutions, such as portable eyewashes, hand wash stations, and proactive thinking attempt to meet safety needs. Autonomous faculty may use practices with risk guidelines help assist change. | Faculty reimbursement for supplies: grocery store low-budget material purchases rather than maintaining a chemical cabinet. Develop or identify safe curricula suggestions and common supplies to meet competencies. Identify standard curricula proper disposal methods or alternative solutions. Provide safe ideas for drop off facilities at hospitals or veterinary disposal for lab animals (Anatomy course). |
Paradigms changed to legally required (1990 OSHA Laboratory Standard). University X did not meet compliance as one indicator of deficiency and poor staff support. Following 2012 ASM Task Force recommended guidelines, knowledgeable faculty advocated addressing risk concerns. Raising awareness of breach in compliance internally results in some measures to attempt compliance, but not always satisfactorily: - Rather than comply, disposal of all chemicals at sites results in lower resources. - Shipping instead of driving chemicals across borders with improper transportation in personal vehicles affects laboratory exercises. - Online microbiology laboratory course cancellation and lost course opportunity. - Institutional discussions to cancel microbiology altogether considered. - Attempts to provide a safe curriculum still continue discouraged environmental isolation microbiology practices as if status quo. | Mandated-policy loopholes and recommended, non-enforceable guidelines meant administration choses only to address some safety needs. Responsiveness varies with exemptions and no watchdog. Centralized command spans large area with communication and leadership gaps. Increasing faculty concern for their safety and culpability with no trained safety officer. Raising awareness of guidelines increases faculty awareness of their risk. Kneejerk response to safety concerns results in lost course, jobs, and student access with greater impacts for low SES under-represented students. | Do not assume even legal mandates are enforced. Use bottom-up community discussions involving faculty knowledge, practices, and addition training and curricula. Suggest safely bought, stored, and transported materials. Develop curricular ideas to sustain at-risk courses and promote social justice. Even if under-resourced or low support, provide educators safety training and curricula resources for their own autonomous decision. Before course cancellation, community solutions may help. |
An introductory undergraduate University X student learned aseptic technique in microbiology laboratory training. He steadfastly isolated and identified his unknown from the “handwashing lab” paper towel environmental source. On Monday returning from a weekend of eating out at a buffet and profuse illness, he also identified his unknown as the toxin-forming Contrast this with an isolate originating from soil in a historically endemic area for Educator fears resurrecting the dormant endospore of the organism responsible for the Henle-Koch Postulates and Germ Theory of Disease. | Without safety protocols, there is no protocol for reporting or diagnosis. Student, staff, and public at risk from laboratory practice. Commonly found Dosage impacts virulence. Several Accidental isolation appears lower risk since laborious process requires particular growth media and techniques, but not a guarantee of safety as passage in an animal host to become pathogenic ( | Safety training begins with students to consider risks of isolating a pure culture. Staff training is also needed if potential contact. These events support following the guidelines for the special environment teaching lab resource ( The risks from two different species vary but with educator concerns for student and staff safety, a risk assessment would rule out these sources from the environment for isolation. |
Guideline illustration “Do not subculture unknown microbes isolated from the environment because they may be organisms that require BSL2 practices and facilities” ( Faculty resist change citing outreach resembles traditional settings. Pasteur and Koch had risks as they searched for the cause of disease in their laboratories, kitchens, or the back room of a house. Faculty cite tradition having long taught “isolation of unknowns” as students swabbed from various sources: spices, soil, bathroom sinks, and toilets, or their own computers, cell phones, and hands. Potential pathogens are commonly found: Online microbiology faculty believe students practicing aseptic technique at home safely. Risk and ethical dilemmas increase with human body source rectal and throat swabs, or animal sources from farm or pets. Faculty believe their farm animal sources to be free of disease. Clinical faculty believe their patient isolates to be safely contained. Each outbreak publicly raises awareness of emerging pathogens from animal sources and points to changing paradigms of outbreak from SARS, MERS, and COVID-19 ( | Wine, beer, and dairy simultaneously studied with causes of outbreaks ( Overly dramatic and timely example provides a valid warning: - Virus causing COVID-19 with its probable animal origin has other possible domesticated drivers promoting its spread ( - Faculty imagine having an outbreak originate from a swabbed isolate through zoonosis from a student’s pet ( - Multistate - Ethical discussions of benefits vs. risks in artwork permeated with pathogenic bacteria ( - Nationwide outbreaks from United States microbiology teaching laboratories transported by cell phones traced back by federal investigations even from well-equipped laboratories within established laboratory safety practices. | First step is prevention of hazards in the environment ( As risks are identified, then faculty more open to change if a balance is found and the imposed mandates protect the public but with fairness and fairly distributed resources. With cost-effective, evidence-based promotion of health, then even if mandates are paternalistic but provide adaptable safe curricula, then all stakeholders could benefit. |
The 2019 Guideline addendum With absolutely no supplies (sometimes because shipments do not arrive), faculty create a microbiology lab but always seeking new safe methods that achieve learning outcomes. They try to fit the guidelines. Grow microbes on potatoes “sterilized” in a microwaved dish and inoculated with “sterilized” Q-tips and observe fungal growth on potatoes sealed to prevent exposure without opening or disturbing. Koch’s postulates are modeled with milk and yogurt cultures. Baker’s yeast shows size comparisons or microscopic eukaryotes with smaller prokaryotes and demonstrates a positive gram stain alongside fermenting bacteria in yogurt or sourdough. | Low-resourced teaching choices are made to find the balance between the need for the content in science education to promote scientific literacy or new discovery in inquiry-based learning with what can be done safely. One argument is traditional microbiology laboratory exercises isolating from environmental, their own human body, or other animal sources provide ease of source materials and low cost when it is not possible to order and maintain stock cultures. Without accessible alternate methods, the updated guidelines pose risks, and ethical decisions with updated guidelines must be made. Continued need for developed and shared curricula, free public health workshops, and recommendations for early reporting if anything amiss. | Update curricula: addressing cell phones, not taking laboratory notebooks home in backpacks, training for donning PPE, isolation, and social distancing. Determine alternate methods to properly prepare and view specimens for examination using microscopy, use pure culture and selective techniques to enrich for and isolate microorganisms and methods to identify microorganisms. Risk is mitigated if students do not open the plates once obtained, or if pure cultures are obtained by isolating from safer, non-pathogenic sources such as yogurt. If selective media is not available, obtain unused, expired plates from hospital clinical laboratory.•Use of alternative sliced potatoes lack firm colony formation, but useful for growth; gelatin lacks higher temperature incubation, but useful for aseptic technique; colored photographs and visual libraries useful for demonstrations and critical thinking exercises but lack hands on. |