Literature DB >> 33896069

Gene and transgenics nomenclature for the laboratory axolotl-Ambystoma mexicanum.

Sergej Nowoshilow1, Ji-Feng Fei2,3, S Randal Voss4,5,6, Elly M Tanaka1, Prayag Murawala7,8.   

Abstract

The laboratory axolotl (Ambystoma mexicanum) is widely used in biological research. Recent advancements in genetic and molecular toolkits are greatly accelerating the work using axolotl, especially in the area of tissue regeneration. At this juncture, there is a critical need to establish gene and transgenic nomenclature to ensure uniformity in axolotl research. Here, we propose guidelines for genetic nomenclature when working with the axolotl.
© 2021 The Authors. Developmental Dynamics published by Wiley Periodicals LLC on behalf of American Association of Anatomists.

Entities:  

Keywords:  Gene; nomenclature guidelines; targeted mutations; transgenics

Mesh：

Year:  2021        PMID： 33896069      PMCID： PMC8542645          DOI： 10.1002/dvdy.351

Source DB:  PubMed          Journal:  Dev Dyn        ISSN： 1058-8388            Impact factor:   2.842


  43 in total

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Journal:  RNA       Date:  2003-03       Impact factor: 4.942

2.  Origin of amphibian and avian chromosomes by fission, fusion, and retention of ancestral chromosomes.

Authors:  Stephen R Voss; D Kevin Kump; Srikrishna Putta; Nathan Pauly; Anna Reynolds; Rema J Henry; Saritha Basa; John A Walker; Jeramiah J Smith
Journal:  Genome Res       Date:  2011-04-11       Impact factor: 9.043

3.  A germline GFP transgenic axolotl and its use to track cell fate: dual origin of the fin mesenchyme during development and the fate of blood cells during regeneration.

Authors:  Lidia Sobkow; Hans-Henning Epperlein; Stephan Herklotz; Werner L Straube; Elly M Tanaka
Journal:  Dev Biol       Date:  2006-01-04       Impact factor: 3.582

4.  Pseudotyped baculovirus is an effective gene expression tool for studying molecular function during axolotl limb regeneration.

Authors:  Catarina R Oliveira; Regis Lemaitre; Prayag Murawala; Akira Tazaki; David N Drechsel; Elly M Tanaka
Journal:  Dev Biol       Date:  2017-11-30       Impact factor: 3.582

5.  Guidelines for the nomenclature of genetic elements in tunicate genomes.

Authors:  Alberto Stolfi; Yasunori Sasakura; Domitille Chalopin; Yutaka Satou; Lionel Christiaen; Christelle Dantec; Toshinori Endo; Magali Naville; Hiroki Nishida; Billie J Swalla; Jean-Nicolas Volff; Ayelet Voskoboynik; Delphine Dauga; Patrick Lemaire
Journal:  Genesis       Date:  2014-10-03       Impact factor: 2.487

6.  Efficient gene knockin in axolotl and its use to test the role of satellite cells in limb regeneration.

Authors:  Ji-Feng Fei; Maritta Schuez; Dunja Knapp; Yuka Taniguchi; David N Drechsel; Elly M Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-31       Impact factor: 11.205

7.  The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources.

Authors:  Leyla Ruzicka; Douglas G Howe; Sridhar Ramachandran; Sabrina Toro; Ceri E Van Slyke; Yvonne M Bradford; Anne Eagle; David Fashena; Ken Frazer; Patrick Kalita; Prita Mani; Ryan Martin; Sierra Taylor Moxon; Holly Paddock; Christian Pich; Kevin Schaper; Xiang Shao; Amy Singer; Monte Westerfield
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

8.  The giant axolotl genome uncovers the evolution, scaling, and transcriptional control of complex gene loci.

Authors:  Siegfried Schloissnig; Akane Kawaguchi; Sergej Nowoshilow; Francisco Falcon; Leo Otsuki; Pietro Tardivo; Nataliya Timoshevskaya; Melissa C Keinath; Jeramiah James Smith; S Randal Voss; Elly M Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-13       Impact factor: 11.205

9.  CRISPR-mediated genomic deletion of Sox2 in the axolotl shows a requirement in spinal cord neural stem cell amplification during tail regeneration.

Authors:  Ji-Feng Fei; Maritta Schuez; Akira Tazaki; Yuka Taniguchi; Kathleen Roensch; Elly M Tanaka
Journal:  Stem Cell Reports       Date:  2014-08-07       Impact factor: 7.765

10.  A versatile depigmentation, clearing, and labeling method for exploring nervous system diversity.

Authors:  Marko Pende; Karim Vadiwala; Hannah Schmidbaur; Alexander W Stockinger; Prayag Murawala; Saiedeh Saghafi; Marcus P S Dekens; Klaus Becker; Roger Revilla-I-Domingo; Sofia-Christina Papadopoulos; Martin Zurl; Pawel Pasierbek; Oleg Simakov; Elly M Tanaka; Florian Raible; Hans-Ulrich Dodt
Journal:  Sci Adv       Date:  2020-05-29       Impact factor: 14.957
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  1 in total

1.  Spatiotemporal control of cell cycle acceleration during axolotl spinal cord regeneration.

Authors:  Emanuel Cura Costa; Leo Otsuki; Aida Rodrigo Albors; Elly M Tanaka; Osvaldo Chara
Journal:  Elife       Date:  2021-05-14       Impact factor: 8.140
  1 in total

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