Literature DB >> 33893175

Nanobody cocktails potently neutralize SARS-CoV-2 D614G N501Y variant and protect mice.

Phillip Pymm1,2, Amy Adair1, Li-Jin Chan1,2, James P Cooney1,2, Francesca L Mordant3, Cody C Allison1,2, Ester Lopez3, Ebene R Haycroft3, Matthew T O'Neill1, Li Lynn Tan1, Melanie H Dietrich1,2, Damien Drew1, Marcel Doerflinger1,2, Michael A Dengler1,2, Nichollas E Scott3, Adam K Wheatley3,4, Nicholas A Gherardin3,5, Hariprasad Venugopal6, Deborah Cromer7,8, Miles P Davenport7, Raelene Pickering9, Dale I Godfrey3,5, Damian F J Purcell3, Stephen J Kent3,4, Amy W Chung3, Kanta Subbarao3,10, Marc Pellegrini1,2, Alisa Glukhova1,11,12, Wai-Hong Tham13,2.   

Abstract

Neutralizing antibodies are important for immunity against SARS-CoV-2 and as therapeutics for the prevention and treatment of COVID-19. Here, we identified high-affinity nanobodies from alpacas immunized with coronavirus spike and receptor-binding domains (RBD) that disrupted RBD engagement with the human receptor angiotensin-converting enzyme 2 (ACE2) and potently neutralized SARS-CoV-2. Epitope mapping, X-ray crystallography, and cryo-electron microscopy revealed two distinct antigenic sites and showed two neutralizing nanobodies from different epitope classes bound simultaneously to the spike trimer. Nanobody-Fc fusions of the four most potent nanobodies blocked ACE2 engagement with RBD variants present in human populations and potently neutralized both wild-type SARS-CoV-2 and the N501Y D614G variant at concentrations as low as 0.1 nM. Prophylactic administration of either single nanobody-Fc or as mixtures reduced viral loads by up to 104-fold in mice infected with the N501Y D614G SARS-CoV-2 virus. These results suggest a role for nanobody-Fc fusions as prophylactic agents against SARS-CoV-2.
Copyright © 2021 the Author(s). Published by PNAS.

Entities:  

Keywords:  SARS-CoV-2; antiviral therapeutics; cryo-EM; crystallography; nanobodies

Mesh:

Substances:

Year:  2021        PMID: 33893175     DOI: 10.1073/pnas.2101918118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  SARS-CoV-2 Delta Variant Decreases Nanobody Binding and ACE2 Blocking Effectivity.

Authors:  Mert Golcuk; Aysima Hacisuleyman; Sema Zeynep Yilmaz; Elhan Taka; Ahmet Yildiz; Mert Gur
Journal:  J Chem Inf Model       Date:  2022-05-09       Impact factor: 6.162

Review 2.  Single-Domain Antibodies as Therapeutics for Respiratory RNA Virus Infections.

Authors:  Keke Huang; Tianlei Ying; Yanling Wu
Journal:  Viruses       Date:  2022-05-27       Impact factor: 5.818

3.  Highly synergistic combinations of nanobodies that target SARS-CoV-2 and are resistant to escape.

Authors:  Fred D Mast; Peter C Fridy; Natalia E Ketaren; Junjie Wang; Erica Y Jacobs; Jean Paul Olivier; Tanmoy Sanyal; Kelly R Molloy; Fabian Schmidt; Magdalena Rutkowska; Yiska Weisblum; Lucille M Rich; Elizabeth R Vanderwall; Nicholas Dambrauskas; Vladimir Vigdorovich; Sarah Keegan; Jacob B Jiler; Milana E Stein; Paul Dominic B Olinares; Louis Herlands; Theodora Hatziioannou; D Noah Sather; Jason S Debley; David Fenyö; Andrej Sali; Paul D Bieniasz; John D Aitchison; Brian T Chait; Michael P Rout
Journal:  Elife       Date:  2021-12-07       Impact factor: 8.140

4.  A bispecific monomeric nanobody induces spike trimer dimers and neutralizes SARS-CoV-2 in vivo.

Authors:  Leo Hanke; Hrishikesh Das; Ben Murrell; Gerald M McInerney; Daniel J Sheward; Laura Perez Vidakovics; Egon Urgard; Ainhoa Moliner-Morro; Changil Kim; Vivien Karl; Alec Pankow; Natalie L Smith; Bartlomiej Porebski; Oscar Fernandez-Capetillo; Erdinc Sezgin; Gabriel K Pedersen; Jonathan M Coquet; B Martin Hällberg
Journal:  Nat Commun       Date:  2022-01-10       Impact factor: 17.694

Review 5.  Nanotechnology-based approaches in the fight against SARS-CoV-2.

Authors:  Alrayan Abass Albaz; Misbahuddin M Rafeeq; Ziaullah M Sain; Wael Abdullah Almutairi; Ali Saeed Alamri; Ahmed Hamdan Aloufi; Waleed Hassan Almalki; Mohammed Tarique
Journal:  AIMS Microbiol       Date:  2021-10-12

6.  Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain.

Authors:  Adam K Wheatley; Phillip Pymm; Robyn Esterbauer; Melanie H Dietrich; Wen Shi Lee; Damien Drew; Hannah G Kelly; Li-Jin Chan; Francesca L Mordant; Katrina A Black; Amy Adair; Hyon-Xhi Tan; Jennifer A Juno; Kathleen M Wragg; Thakshila Amarasena; Ester Lopez; Kevin J Selva; Ebene R Haycroft; James P Cooney; Hariprasad Venugopal; Li Lynn Tan; Matthew T O Neill; Cody C Allison; Deborah Cromer; Miles P Davenport; Richard A Bowen; Amy W Chung; Marc Pellegrini; Mark T Liddament; Alisa Glukhova; Kanta Subbarao; Stephen J Kent; Wai-Hong Tham
Journal:  Cell Rep       Date:  2021-09-25       Impact factor: 9.423

7.  A potent SARS-CoV-2 neutralising nanobody shows therapeutic efficacy in the Syrian golden hamster model of COVID-19.

Authors:  Jiandong Huo; Halina Mikolajek; Audrey Le Bas; Jordan J Clark; Parul Sharma; Anja Kipar; Joshua Dormon; Chelsea Norman; Miriam Weckener; Daniel K Clare; Peter J Harrison; Julia A Tree; Karen R Buttigieg; Francisco J Salguero; Robert Watson; Daniel Knott; Oliver Carnell; Didier Ngabo; Michael J Elmore; Susan Fotheringham; Adam Harding; Lucile Moynié; Philip N Ward; Maud Dumoux; Tessa Prince; Yper Hall; Julian A Hiscox; Andrew Owen; William James; Miles W Carroll; James P Stewart; James H Naismith; Raymond J Owens
Journal:  Nat Commun       Date:  2021-09-22       Impact factor: 14.919

Review 8.  Prospects of Neutralizing Nanobodies Against SARS-CoV-2.

Authors:  Fangfang Chen; Zhihong Liu; Fan Jiang
Journal:  Front Immunol       Date:  2021-05-28       Impact factor: 7.561

Review 9.  The success of SARS-CoV-2 vaccines and challenges ahead.

Authors:  Kanta Subbarao
Journal:  Cell Host Microbe       Date:  2021-07-14       Impact factor: 21.023

Review 10.  Animal models of SARS-CoV-2 and COVID-19 for the development of prophylactic and therapeutic interventions.

Authors:  Marcel Renn; Eva Bartok; Thomas Zillinger; Gunther Hartmann; Rayk Behrendt
Journal:  Pharmacol Ther       Date:  2021-06-23       Impact factor: 12.310

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