| Literature DB >> 33891529 |
Matthew M Churpek1, Shruti Gupta2, Alexandra B Spicer3, William F Parker4, John Fahrenbach4, Samantha K Brenner5, David E Leaf6.
Abstract
RATIONALE: Variation in hospital mortality has been described for coronavirus disease 2019 (COVID-19), but the factors that explain these differences remain unclear.Entities:
Keywords: COVID-19; Critical Care; Health Disparities; Intensive Care Unit
Mesh:
Year: 2021 PMID: 33891529 PMCID: PMC8480242 DOI: 10.1164/rccm.202012-4547OC
Source DB: PubMed Journal: Am J Respir Crit Care Med ISSN: 1073-449X Impact factor: 21.405
Patient Characteristics at Baseline
| Variable | All Patients ( | 28-Day Survivors ( | 28-Day Nonsurvivors ( |
|---|---|---|---|
| Demographics and preexisting comorbidities | |||
| Demographics | |||
| Age, yr, median (IQR) | 63 (53–72) | 60 (49–68) | 68 (59–76) |
| Sex, M, | 2,532 (63.0) | 1,520 (61.2) | 1,012 (65.8) |
| Race, | |||
| White | 1,527 (38.0%) | 950 (38.3%) | 577 (37.5) |
| Black | 1,238 (30.8%) | 782 (31.5%) | 456 (29.7%) |
| Other | 328 (8.2%) | 213 (8.6%) | 115 (7.5%) |
| Unknown/not reported | 926 (23.0%) | 537 (21.6%) | 389 (25.3%) |
| Ethnicity, | |||
| Hispanic | 954 (23.7%) | 601 (24.2%) | 353 (23.0%) |
| Non-Hispanic | 2,600 (64.7%) | 1,604 (64.6%) | 996 (64.8%) |
| Unknown/not reported | 465 (11.6%) | 277 (11.2%) | 188 (12.2%) |
| Current or former smoker, | 1,039 (25.9) | 581 (23.4) | 458 (29.8) |
| BMI, kg/m2, median (IQR) | 30.2 (26.3–35.5) | 30.6 (26.5–35.9) | 29.7 (26.0–34.9) |
| Preexisting comorbidities, | |||
| Active cancer | 190 (4.7) | 80 (3.2) | 110 (7.2) |
| Congestive heart failure | 425 (10.6) | 224 (9.0) | 201 (13.1) |
| Chronic obstructive pulmonary disease | 356 (8.9) | 175 (7.1) | 181 (11.8) |
| Coronary artery disease | 567 (14.1) | 277 (11.2) | 290 (18.9) |
| Diabetes | 1,713 (42.6) | 972 (39.2) | 741 (48.2) |
| End-stage renal disease | 153 (3.8) | 79 (3.2) | 74 (4.8) |
| Hypertension | 2,476 (61.6) | 1,398 (56.3) | 1,078 (70.1) |
| Physiology | |||
| Vital signs | |||
| Altered mental status, | 997 (24.8) | 420 (16.9) | 577 (37.5) |
| Heart rate, beats/min, median (IQR) | 105 (91–120) | 103 (90–118) | 109 (93–125) |
| Respiratory rate, breaths/min, median (IQR) | 32 (26–39) | 32 (26–39) | 31 (26–38) |
| Systolic blood pressure, mm Hg, median (IQR) | 97 (85–111) | 99 (88–112) | 94 (82–109) |
| Temperature, °C, median (IQR) | 37.9 (37.2–38.8) | 38.0 (37.2–38.8) | 37.8 (37.1–38.7) |
| Laboratory results | |||
| Arterial pH, median (IQR) | 7.3 (7.3–7.4) | 7.4 (7.3–7.4) | 7.3 (7.2–7.4) |
| Aspartate aminotransferase, U/L, median (IQR) | 60 (39–86) | 56 (37–79) | 67 (42–105) |
| Creatinine, mg/dl, median (IQR) | 1.2 (0.9–2.1) | 1.1 (0.8–1.6) | 1.6 (1.1–2.9) |
| C-reactive protein, mg/L, median (IQR) | 173 (115–238) | 168 (108–229) | 185 (127–250) |
| D-dimer, ng/ml, median (IQR) | 2,340 (1,015–6,135) | 2,024 (825–4,340) | 3,841 (1,593–9,305) |
| Ferritin, ng/ml, median (IQR) | 1,291 (661–2,214) | 1,177 (622–1,933) | 1,588 (776–2,682) |
| High troponin indicator, | 1,769 (44.0) | 820 (33.0) | 949 (61.7) |
| Lactate, mmol/L, median (IQR) | 1.7 (1.3–2.4) | 1.6 (1.3–2.1) | 2.0 (1.4–2.9) |
| Lymphocytes, %, median (IQR) | 8.9 (5.4–13.3) | 10.0 (6.4–14.6) | 7.1 (4.0–11.1) |
| Procalcitonin, | 1.3 (0.2–4.6) | 0.8 (0.2–2.3) | 1.4 (0.5–8.0) |
| Sodium, | 137 (134–140) | 136 (134–139) | 137 (134–141) |
| Urine output, ml, median (IQR) | 716 (436–1,000) | 792 (550–1,050) | 579 (300–875) |
| WBC count per mm3, median (IQR) | 9.6 (6.8–13.3) | 9.0 (6.5–12.1) | 10.6 (7.6–15.1) |
| Severity of Illness | |||
| P/F ratio, | 131 (102–158) | 135 (112–159) | 123 (86–155) |
| Invasive mechanical ventilation, | 2,681 (66.7) | 1,449 (58.4) | 1,232 (80.2) |
| Renal replacement therapy, | 258 (6.4) | 118 (4.8) | 140 (9.1) |
| Vasopressors, | |||
| One | 1,367 (34.0) | 790 (31.8) | 577 (37.5) |
| Two or more | 648 (16.1) | 282 (11.4) | 366 (23.8) |
| Treatments, | |||
| Aspirin | 696 (17.3) | 389 (15.7) | 307 (20.0) |
| Azithromycin | 2,003 (49.8) | 1,270 (51.2) | 733 (47.7) |
| Hydroxychloroquine | 2,423 (60.3) | 1,457 (58.7) | 966 (62.8) |
| Neuromuscular blockade | 812 (20.2) | 428 (17.2) | 384 (25.0) |
| Prone positioning | 1,087 (27.0) | 663 (26.7) | 424 (27.6) |
| Remdesivir | 238 (5.9) | 168 (6.8) | 70 (4.6) |
| Statin | 913 (22.7) | 553 (22.3) | 360 (23.4) |
| Corticosteroid | 1,057 (26.3) | 522 (21.0) | 535 (34.8) |
| Tocilizumab | 497 (12.4) | 331 (13.3) | 166 (10.8) |
| Vitamin C | 281 (7.0) | 148 (6.0) | 133 (8.7) |
Definition of abbreviations: BMI = body mass index; IQR = interquartile range; PEEP = positive end-expiratory pressure; P/F = PaO/Fi O; WBC = white blood cell.
Data regarding troponin were missing for 2,544 (63%), data regarding P/F were missing for 1,576 (39%), data regarding PEEP Day 1 were missing for 1,513 (38%), data regarding procalcitonin were missing for 1,455 (36%), data regarding D-dimer were missing for 1,233 (31%), data regarding urine output were missing for 1,210 (30%), data regarding lactate were missing for 1,198 (30%), data regarding ferritin were missing for 1,054 (26%), data regarding CRP were missing for 926 (23%), data regarding arterial pH were missing for 902 (22%), data regarding smoking status were missing for 745 (19%), data regarding lymphocytes were missing for 36 (11%), data regarding aspartate aminotransferase were missing for 353 (9%), data regarding mental status were missing for 220 (5%), data regarding PEEP Day 2 were missing for 163 (4%), data for BMI were missing for 152 (4%), data regarding WBC counts were missing for 77 (2%), data regarding creatinine were missing for 70 (2%), and data regarding sodium were missing for 24 (<1%). Missing data were imputed by using bagImpute and are included in the table.
P value of <0.05 for difference between survivors and nonsurvivors (Wilcoxon rank sum test for continuous variables and chi-square test for categorical variables).
Collected on ICU admission.
Worst value or if occurred anytime during Days 1–2 in the ICU.
Troponin T or I value greater than the 99th percentile upper reference limit of normal for that laboratory test.
Refers to the P/F ratio and was only recorded in patients receiving invasive mechanical ventilation. Other values were imputed.
Received renal replacement therapy for acute or chronic renal failure.
Included phenylephrine hydrochloride, epinephrine, norepinephrine bitartrate, vasopressin, dopamine hydrochloride, dobutamine, and milrinone.
Hospital Characteristics for Patients Included in the Study
| Variable | All Patients ( | 28-Day Survivors ( | 28-Day Nonsurvivors ( |
|---|---|---|---|
| Socioeconomics of hospital pop | |||
| Commute to work takes >45 min, % of pop, median (IQR) | 18.3 (12.9 to 25.5) | 17.8 (11.8 to 21.0) | 23.4 (15.9 to 29.3) |
| In households speaking English only, % of pop, median (IQR) | 72.6 (62.7 to 80.9) | 72.9 (64.3 to 82.4) | 70.9 (61.8 to 78.9) |
| Uninsured, % of pop, median (IQR) | 9.1 (5.7 to 13.0) | 9.0 (5.7 to 13.0) | 10.0 (5.6 to 13.0) |
| Of Black race, % of pop, median (IQR) | 15.2 (8.9 to 27.0) | 16.2 (9.7 to 27.0) | 15.2 (8.3 to 28.0) |
| Dual eligible, % of pop, median (IQR) | 2.5 (1.3 to 3.3) | 2.6 (1.5 to 3.2) | 2.3 (1.3 to 3.3) |
| High school diploma, % of pop, median (IQR) | 88.0 (83.3 to 93.5) | 88.1 (83.2 to 92.3) | 87.4 (83.3 to 94.5) |
| Unemployed, % of pop, median (IQR) | 7.3 (5.6 to 9.7) | 7.3 (5.6 to 9.2) | 7.3 (5.3 to 9.7) |
| In single-parent households, % of pop, median (IQR) | 17.4 (12.8 to 22.1) | 17.0 (12.8 to 22.1) | 17.5 (13.1 to 22.2) |
| Mean household size, median (IQR) | 2.5 (2.3 to 2.8) | 2.5 (2.2 to 2.7) | 2.7 (2.4 to 2.9) |
| Mean median home value, $, median (IQR) | 305,629 (212,487 to 519,842) | 275,506 (206,403 to 519,842) | 392,285 (229,155 to 519,842) |
| Mean median income, $, median (IQR) | 63,078 (50,637 to 87,753) | 62,915 (51,208 to 87,754) | 64,957 (49,753 to 96,175) |
| Metro area, | 3,534 (87.9) | 2,124 (85.6) | 1,410 (91.7) |
| Hospital strain, median (IQR) | |||
| Hospital ICU beds w/ STOP-COVID patients, | 37.5 (14.4 to 69.6) | 30.6 (12.3 to 53.8) | 48.2 (19.0 to 104.3) |
| County pop | 932,202 (798,975 to 1,628,706) | 945,726 (593,490 to 1,628,706) | 932,202 (798,975 to 1,628,706) |
| ICU occupancy rate | 75.0 (58.7 to 83.2) | 76.4 (63.2 to 84.2) | 69.3 (54.2 to 82.1) |
| Number of hospital medical–surgical beds | 510 (329 to 718) | 555 (358 to 733) | 437 (266 to 691) |
| Hospital total occupancy rate | 77.3 (69.5 to 84.6) | 79.5 (69.6 to 84.6) | 74.6 (66.8 to 84.5) |
| Number of ICU beds before COVID-19 | 88 (48 to 112) | 98 (54 to 115) | 53 (47 to 98) |
| Total number of county COVID-19 cases in the 30 d before admission | 1,743 (475 to 5,845) | 1,416 (398 to 4,585) | 2,279 (640 to 7,268) |
| Total number of hospital beds | 682 (448 to 1,006) | 794 (522 to 1,006) | 610 (355 to 937) |
| Total number of hospital beds in the county | 3,411 (2,286 to 5,326) | 3,657 (2,156 to 5,344) | 2,768 (2,310 to 5,069) |
| In COVID-19 ICU or surge, | 3,047 (76) | 1,879 (76) | 1,168 (76) |
| Hospital quality, median (IQR) | |||
| Standardized outcomes mortality score | 0.9 (0.4 to 1.9) | 1.0 (0.4 to 2.0) | 0.5 (0.4 to 1.4) |
| Standardized outcomes readmission score | −0.9 (−2.0 to 0.4) | −0.9 (−1.7 to 0.4) | −0.9 (−2.2 to 0.4) |
| Standardized outcomes safety score | −0.1 (−1.1 to 0.6) | −0.1 (−1.0 to 0.7) | −0.3 (−1.7 to 0.2) |
| Standardized patient experience score | −0.3 (−0.7 to 0.4) | 0.0 (−0.6 to 0.4) | −0.6 (−0.9 to 0.2) |
| Standardized process effect score | −0.1 (−0.8 to 0.6) | 0.1 (−0.5 to 0.6) | −0.3 (−1.4 to 0.5) |
| Standardized process time score | −1.6 (−2.8 to 0.8) | −1.6 (−2.7 to 0.9) | −1.6 (−2.8 to 0.4) |
| Study day | 30 (23 to 40) | 30 (23 to 41) | 30 (23 to 39) |
| Hospital treatment intensity, | |||
| Patients vented w/ a P/F ratio <150 receiving more intense therapies, % | 60 (47 to 67) | 57 (47 to 67) | 63 (43 to 67) |
Definition of abbreviations: COVID-19 = coronavirus disease; IQR = interquartile range; P/F = PaO/FiO; pop = population; STOP-COVID = Study of the Treatment and Outcomes in Critically Ill Patients w/ COVID-19; w/ = with.
Data regarding ICU occupancy rate were missing for 97 (2%). Missing data were imputed by using bagImpute and are included in the table.
P < 0.05 for difference between survivors and nonsurvivors (Wilcoxon rank sum test for continuous variables and chi-square test for categorical variables).
Time varying based on the date of patient admission.
Figure 1.
Case mix–adjusted probabilities of 28-day mortality. The graphs illustrate the change in interhospital variation in death as each domain is added to the unadjusted mixed-effect model (leftmost panel) and end with the fully adjusted model (rightmost panel), which shows that most of the variation in mortality across hospitals can be explained by the domains included. The x-axis is hospital ranked by increasing probability of death in 28 days, and the y-axis shows the case mix–adjusted probability of death in the mixed-effect regression model, with the red dots denoting the point estimates and the whiskers denoting the 95% confidence intervals. The median OR and range in mortality are presented for each model. Demo = demographics; OR = odds ratio; SES = socioeconomic status.
Figure 2.
Contributions to 28-day mortality risk based on Shapley values. The figure illustrates the relative contribution of all variables in each domain based on Shapley values calculated from the XGBoost machine learning model (red bars; left y-axis). The cumulative contribution of the domains, moving from left to right in the figure, is shown with the line plot (right y-axis). Demo = demographics; SES = socioeconomic status.