| Literature DB >> 33888984 |
Stéphane Potvin1,2, Charles-Édouard Giguère1, Adrianna Mendrek3.
Abstract
BACKGROUND: Robust evidence shows that schizophrenia is associated with significant cognitive impairments, including deficits in visuospatial abilities. While other cognitive domains have sparked several functional neuroimaging studies in schizophrenia, only a few brain activation studies have examined the neural correlates of visuospatial abilities in schizophrenia.Entities:
Keywords: functional connectivity; machine learning; mental rotation; schizophrenia
Year: 2021 PMID: 33888984 PMCID: PMC8055358 DOI: 10.2147/NDT.S304434
Source DB: PubMed Journal: Neuropsychiatr Dis Treat ISSN: 1176-6328 Impact factor: 2.570
Characteristics of Participants
| Schizophrenia (n=39) | Controls (n=42) | Statistics | |
|---|---|---|---|
| Age, mean (SD) | 32.5 (6.9) | 30.5 (8.5) | F=1.34; p=0.250 |
| Sex | 20M/19F | 20M/22F | χ2=0.1; p=0.457 |
| Handedness | 36 right | 38 right | χ2=0.09; p=0.542 |
| Duration of illness (years) | 9.8 (7.1) | — | — |
| Education (years) | 11.6 (3.1) | 17.9 (3.7) | F=68.3; p<0.001 |
| PANSS-Positive | 18.9 (6.7) | — | — |
| PANSS-Negative | 20.8 (6.9) | — | — |
| PANSS-General | 41.2 (9.9) | — | — |
| Olanzapine equivalents (mg/d) | 18.9 (10.4) | — | — |
| Mental rotation accuracy (%) | 71.3 (17.8) | 84.8 (14.9) | F=13.1; p=0.001 |
Abbreviations: PANSS, Positive and Negative Syndrome Scale; SD, standard deviation.
Number of Patients and Controls in Each Random Sample
| Controls | Schizophrenia | Total | |
|---|---|---|---|
| Training sample | 30 (37.0%) | 30 (37.0%) | 60 (74.1%) |
| Test sample | 12 (14.8%) | 9 (11.1%) | 21 (25.9%) |
| Total | 42 (51.9%) | 39 (48.1%) | 81 (100%) |
Notes: χ2= 0.096; df = 1; p=0.76.
Connections Used in the Machine Learning Algorithms
| Right superior frontal gyrus | Left superior frontal gyrus |
| Right inferior frontal gyrus | |
| Right superior parietal lobule | |
| Left superior parietal lobule | |
| Right angular gyrus | |
| Left inferior lateral occipital cortex | |
| Left superior frontal gyrus | Right middle frontal gyrus |
| Right inferior frontal gyrus | |
| Left inferior frontal gyrus | |
| Left superior parietal lobule | |
| Right angular gyrus | |
| Left inferior lateral occipital cortex | |
| Right middle frontal gyrus | Left middle frontal gyrus |
| Left inferior frontal gyrus | |
| Left precentral gyrus | |
| Right angular gyrus | |
| Left angular gyrus | |
| Left middle frontal gyrus | Left superior parietal lobule |
| Right angular gyrus | |
| Left inferior lateral occipital cortex | |
| Right inferior frontal gyrus | Left precentral gyrus |
| Right angular gyrus | |
| Right inferior lateral occipital cortex | |
| Left inferior frontal gyrus | Right superior parietal lobule |
| Left inferior lateral occipital cortex | |
| Right precentral gyrus | Left inferior lateral occipital cortex |
| Left precentral gyrus | Right inferior lateral occipital cortex |
| Left inferior lateral occipital cortex | |
| Left superior parietal lobule | Left inferior lateral occipital cortex |
| Right angular gyrus | Left angular gyrus |
| Left angular gyrus | Left inferior lateral occipital cortex |
Comparison of the Performance of the Five Machine Learning Algorithms (Training; n=60*)
| Lasso | Ridge | Random Forest | LDA | SVM | |
|---|---|---|---|---|---|
| % of good classification (95% CI) | 81.7% (68.3, 91.7) | 81.7% (71.7, 91.7) | 88.3% (83.3, 95.0) | 81.7% (69.1, 93) | 81.7% (5.0, 95) |
| Sensibility | 83.6% (58.8, 95.6) | 85.2% (64.5, 97.1) | 89.3% (71.1, 98.7) | 84.8% (64.3, 93.8) | 79.4% (2.9, 95.6) |
| Specificity | 79.7% (55.5, 93.2) | 80.3% (56.0, 96.0) | 89.5% (69.7, 97.3) | 80.7% (64.5, 95.9 | 77.5% (6.1, 97.0) |
| ROC curve AUC | 0.871 (0.70, 0.95) | 0.878 (0.79, 0.95) | 0.962 (0.93, 0.99) | 0.784 (0.62, 0.93) | 0.907 (0.82, 0.98) |
Note: *Leave-one-out cross-validation.
Abbreviations: AUC, area under the curve; LDA, linear discriminant analysis; ROC, receiving.
Comparison of the Performance of the Five Machine Learning Algorithms (Test; n=21)
| Lasso | Ridge | Random Forest | LDA | SVM | |
|---|---|---|---|---|---|
| % of good classification (95% CI) | 85.7% (71.4, 95.2) | 81.0% (61.9, 95.2) | 76.2% (52.4, 90.5) | 81.0% (66.7, 95.2) | 85.7% (68.9, 1.00) |
| Sensitivity | 83.3% (60.7, 100) | 83.3% (57.7, 100) | 83.3% (61.5, 100) | 83.3% (60.7, 100) | 91.7% (72.0, 100) |
| Specificity | 88.9% (65.1, 100) | 77.8% (50.0, 100) | 66.7% (26.7, 92.3) | 77.8% (46.3, 100) | 77.8% (46.3, 100) |
| ROC curve AUC | 0.861 (0.64, 1.00) | 0.806 (0.52, 0.98) | 0.796 (0.50, 0.94) | 0.870 (0.58, 1.00) | 0.806 (0.56, 1.00) |
Abbreviations: AUC, area under the curve; LDA, linear discriminant analysis; ROC, Receiving Operating Characteristic; SVM, support vector machine.
Coefficients from the Logistic Regression with Lasso Regularization
| Connection | Lasso Beta (No MR) | Lasso Beta (with MR) |
|---|---|---|
| Intercept | 0.019 | 0.16 |
| Right and left superior frontal gyrus | −0.055 | −0.036 |
| Left superior frontal gyrus and left superior parietal lobule | 0.254 | 0.183 |
| Left superior frontal gyrus and left inferior lateral occipital cortex | −0.063 | −0.016 |
| Right and left middle frontal gyrus | −0.196 | −0.172 |
| Right inferior frontal gyrus and left precentral gyrus | −0.019 | — |
| Left precentral gyrus and left inferior lateral occipital cortex | −0.199 | −0.183 |
Abbreviation: MR, mental rotation accuracy.
Figure 1Impaired connectivity in schizophrenia during visuospatial processing. Figure 1 illustrates the complex pattern of dysconnectivity observed in schizophrenia during visuospatial processing. The figure was generated using a two-sample t-test performed in CONN Toolbox.
ROI-to-ROI Connectivity Between Schizophrenia Patients and Healthy Controls During Mental Rotation (Inferential Statistics)
| Connexion | t-Value | Schizophrenia Fischer’s-z | Controls Fischer’s-z |
|---|---|---|---|
| Controls > schizophrenia | |||
| Left middle frontal gyrus - right middle frontal gyrus | 4.17 * | −0.060 (0.208) | 0.133 (0.208) |
| Left superior frontal gyrus - right superior frontal gyrus | 3.78 | −0.050 (0.263) | 0.143 (0.195) |
| Left precentral gyrus - left inferior lateral occipital cortex | 3.62 | −0.0630 (0.264) | 0.114 (0.170) |
| Left angular gyrus - right angular gyrus | 3.41 | −0.090 (0.225) | 0.073 (0.204) |
| Left precentral gyrus - right interior frontal gyrus (triangularis) | 3.04 | −0.058 (0.246) | 0.109 (0.249) |
| Left precentral gyrus - right middle frontal gyrus | 2.99 | −0.024 (0.201) | 0.125 (0.243) |
| Left superior frontal gyrus - right inferior frontal gyrus (triangularis) | 2.94 | −0.053 (0.213) | 0.094 (0.237) |
| Schizophrenia > controls | |||
| Left superior parietal gyrus - left superior frontal gyrus | 3.68 | 0.084 (0.200) | −0.077 (0.194) |
Note: *All ps<0.05, corrected for false discovery rate.