Literature DB >> 33885769

Divergent Gene Expression Following Duplication of Meiotic Genes in the Stick Insect Clitarchus hookeri.

Chen Wu1,2,3, Victoria G Twort1,2,4, Richard D Newcomb1,3, Thomas R Buckley1,2.   

Abstract

Some animal groups, such as stick insects (Phasmatodea), have repeatedly evolved alternative reproductive strategies, including parthenogenesis. Genomic studies have found modification of the genes underlying meiosis exists in some of these animals. Here we examine the evolution of copy number, evolutionary rate, and gene expression in candidate meiotic genes of the New Zealand geographic parthenogenetic stick insect Clitarchus hookeri. We characterized 101 genes from a de novo transcriptome assembly from female and male gonads that have homology with meiotic genes from other arthropods. For each gene we determined copy number, the pattern of gene duplication relative to other arthropod orthologs, and the potential for meiosis-specific expression. There are five genes duplicated in C. hookeri, including one also duplicated in the stick insect Timema cristinae, that are not or are uncommonly duplicated in other arthropods. These included two sister chromatid cohesion associated genes (SA2 and SCC2), a recombination gene (HOP1), an RNA-silencing gene (AGO2) and a cell-cycle regulation gene (WEE1). Interestingly, WEE1 and SA2 are also duplicated in the cyclical parthenogenetic aphid Acyrthosiphon pisum and Daphnia duplex, respectively, indicating possible roles in the evolution of reproductive mode. Three of these genes (SA2, SCC2, and WEE1) have one copy displaying gonad-specific expression. All genes, with the exception of WEE1, have significantly different nonsynonymous/synonymous ratios between the gene duplicates, indicative of a shift in evolutionary constraints following duplication. These results suggest that stick insects may have evolved genes with novel functions in gamete production by gene duplication.
© The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Entities:  

Keywords:  Phasmatodea; gene duplication; gene expression; meiotic gene; parthenogenesis; phylogenetic distribution

Mesh:

Year:  2021        PMID: 33885769      PMCID: PMC8155549          DOI: 10.1093/gbe/evab060

Source DB:  PubMed          Journal:  Genome Biol Evol        ISSN: 1759-6653            Impact factor:   3.416


  82 in total

1.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

2.  Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests.

Authors:  David Posada; Thomas R Buckley
Journal:  Syst Biol       Date:  2004-10       Impact factor: 15.683

3.  Cloning and expression analysis of a meiosis-specific MutS homolog: the human MSH4 gene.

Authors:  V Paquis-Flucklinger; S Santucci-Darmanin; R Paul; A Saunières; C Turc-Carel; C Desnuelle
Journal:  Genomics       Date:  1997-09-01       Impact factor: 5.736

4.  DNA reduplication during meiotic prophase in the oocytes of Carausius morosus Br. (Insecta, Cheleutoptera).

Authors:  P Koch; L P Pijnacker; J Kreke
Journal:  Chromosoma       Date:  1972       Impact factor: 4.316

5.  Inventory and phylogenetic analysis of meiotic genes in monogonont rotifers.

Authors:  Sara J Hanson; Andrew M Schurko; Bette Hecox-Lea; David B Mark Welch; Claus-Peter Stelzer; John M Logsdon
Journal:  J Hered       Date:  2013-03-13       Impact factor: 2.645

Review 6.  Sister chromatid cohesion.

Authors:  Jan-Michael Peters; Tomoko Nishiyama
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-11-01       Impact factor: 10.005

7.  Interaction of Mre11 and Rad50: two proteins required for DNA repair and meiosis-specific double-strand break formation in Saccharomyces cerevisiae.

Authors:  K Johzuka; H Ogawa
Journal:  Genetics       Date:  1995-04       Impact factor: 4.562

8.  The Wee1 protein kinase regulates T14 phosphorylation of fission yeast Cdc2.

Authors:  G J Den Haese; N Walworth; A M Carr; K L Gould
Journal:  Mol Biol Cell       Date:  1995-04       Impact factor: 4.138

9.  Geographic parthenogenesis and the common tea-tree stick insect of New Zealand.

Authors:  Mary Morgan-Richards; Steve A Trewick; Ian A N Stringer
Journal:  Mol Ecol       Date:  2010-02-15       Impact factor: 6.185

10.  FastUniq: a fast de novo duplicates removal tool for paired short reads.

Authors:  Haibin Xu; Xiang Luo; Jun Qian; Xiaohui Pang; Jingyuan Song; Guangrui Qian; Jinhui Chen; Shilin Chen
Journal:  PLoS One       Date:  2012-12-20       Impact factor: 3.240

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  1 in total

1.  Argonaute1 and Gawky Are Required for the Development and Reproduction of Melon fly, Zeugodacus cucurbitae.

Authors:  Momana Jamil; Shakil Ahmad; Yingqiao Ran; Siya Ma; Fengqin Cao; Xianwu Lin; Rihui Yan
Journal:  Front Genet       Date:  2022-06-23       Impact factor: 4.772

  1 in total

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