Literature DB >> 33883780

Evolutionary trait-based approaches for predicting future global impacts of plant pathogens in the genus Phytophthora.

Louise J Barwell1, Ana Perez-Sierra2, Beatrice Henricot3, Anna Harris2, Treena I Burgess4, Giles Hardy4, Peter Scott5, Nari Williams6, David E L Cooke7, Sarah Green3, Daniel S Chapman8, Bethan V Purse1.   

Abstract

Plant pathogens are introduced to new geographical regions ever more frequently as global connectivity increases. Predicting the threat they pose to plant health can be difficult without in-depth knowledge of behaviour, distribution and spread. Here, we evaluate the potential for using biological traits and phylogeny to predict global threats from emerging pathogens.We use a species-level trait database and phylogeny for 179 Phytophthora species: oomycete pathogens impacting natural, agricultural, horticultural and forestry settings. We compile host and distribution reports for Phytophthora species across 178 countries and evaluate the power of traits, phylogeny and time since description (reflecting species-level knowledge) to explain and predict their international transport, maximum latitude and host breadth using Bayesian phylogenetic generalised linear mixed models.In the best-performing models, traits, phylogeny and time since description together explained up to 90%, 97% and 87% of variance in number of countries reached, latitudinal limits and host range, respectively. Traits and phylogeny together explained up to 26%, 41% and 34% of variance in the number of countries reached, maximum latitude and host plant families affected, respectively, but time since description had the strongest effect.Root-attacking species were reported in more countries, and on more host plant families than foliar-attacking species. Host generalist pathogens had thicker-walled resting structures (stress-tolerant oospores) and faster growth rates at their optima. Cold-tolerant species are reported in more countries and at higher latitudes, though more accurate interspecific empirical data are needed to confirm this finding. Policy implications. We evaluate the potential of an evolutionary trait-based framework to support horizon-scanning approaches for identifying pathogens with greater potential for global-scale impacts. Potential future threats from Phytophthora include Phytophthora x heterohybrida, P. lactucae, P. glovera, P. x incrassata, P. amnicola and P. aquimorbida, which are recently described, possibly under-reported species, with similar traits and/or phylogenetic proximity to other high-impact species. Priority traits to measure for emerging species may be thermal minima, oospore wall index and growth rate at optimum temperature. Trait-based horizon-scanning approaches would benefit from the development of international and cross-sectoral collaborations to deliver centralised databases incorporating pathogen distributions, traits and phylogeny.
© 2020 The Authors. Journal of Applied Ecology published by John Wiley & Sons Ltd on behalf of British Ecological Society.

Entities:  

Keywords:  biosecurity; global transport; horizon scanning; host range; invasiveness; pathogen; plant health; traits

Year:  2020        PMID: 33883780      PMCID: PMC8048555          DOI: 10.1111/1365-2664.13820

Source DB:  PubMed          Journal:  J Appl Ecol        ISSN: 0021-8901            Impact factor:   6.528


  38 in total

1.  Virulence evolution and the trade-off hypothesis: history, current state of affairs and the future.

Authors:  S Alizon; A Hurford; N Mideo; M Van Baalen
Journal:  J Evol Biol       Date:  2009-02       Impact factor: 2.411

2.  A meta-analysis of trait differences between invasive and non-invasive plant species.

Authors:  Mark van Kleunen; Ewald Weber; Markus Fischer
Journal:  Ecol Lett       Date:  2010-02       Impact factor: 9.492

Review 3.  Fitness of multidimensional phenotypes in dynamic adaptive landscapes.

Authors:  Daniel C Laughlin; Julie Messier
Journal:  Trends Ecol Evol       Date:  2015-06-26       Impact factor: 17.712

4.  The relationship between parasite virulence and environmental persistence: a meta-analysis.

Authors:  Charlotte Rafaluk-Mohr
Journal:  Parasitology       Date:  2019-02-19       Impact factor: 3.234

5.  Re-evaluation of Phytophthora Species Isolated During 30 Years of Vegetation Health Surveys in Western Australia Using Molecular Techniques.

Authors:  Treena I Burgess; Janet L Webster; Juanita A Ciampini; Diane White; Giles E StJ Hardy; Michael J C Stukely
Journal:  Plant Dis       Date:  2009-03       Impact factor: 4.438

6.  Guidance on quantitative pest risk assessment.

Authors:  Michael Jeger; Claude Bragard; David Caffier; Thierry Candresse; Elisavet Chatzivassiliou; Katharina Dehnen-Schmutz; Jean-Claude Grégoire; Josep Anton Jaques Miret; Alan MacLeod; Maria Navajas Navarro; Björn Niere; Stephen Parnell; Roel Potting; Trond Rafoss; Vittorio Rossi; Gregor Urek; Ariena Van Bruggen; Wopke Van Der Werf; Jonathan West; Stephan Winter; Andy Hart; Jan Schans; Gritta Schrader; Muriel Suffert; Virag Kertész; Svetla Kozelska; Maria Rosaria Mannino; Olaf Mosbach-Schulz; Marco Pautasso; Giuseppe Stancanelli; Sara Tramontini; Sybren Vos; Gianni Gilioli
Journal:  EFSA J       Date:  2018-08-03

7.  Modeling climate impact on an emerging disease, the Phytophthora alni-induced alder decline.

Authors:  Jaime Aguayo; Fabrice Elegbede; Claude Husson; François-Xavier Saintonge; Benoît Marçais
Journal:  Glob Chang Biol       Date:  2014-05-22       Impact factor: 10.863

8.  Trait differences between naturalized and invasive plant species independent of residence time and phylogeny.

Authors:  R V Gallagher; R P Randall; M R Leishman
Journal:  Conserv Biol       Date:  2014-11-04       Impact factor: 6.560

9.  Untangling the fungal niche: the trait-based approach.

Authors:  Thomas W Crowther; Daniel S Maynard; Terence R Crowther; Jordan Peccia; Jeffrey R Smith; Mark A Bradford
Journal:  Front Microbiol       Date:  2014-10-31       Impact factor: 5.640

10.  Does pathogen plasticity facilitate host shifts?

Authors:  Henrik H De Fine Licht
Journal:  PLoS Pathog       Date:  2018-05-03       Impact factor: 6.823

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