Literature DB >> 33882673

Key Differences of the Hydrate Shell Structures of ATP and Mg·ATP Revealed by Terahertz Time-Domain Spectroscopy and Dynamic Light Scattering.

Nikita V Penkov1, Nadezda Penkova2.   

Abstract

ATP is one of the main biological molecules. Many of its biological and physicochemical properties, such as energy capacity of the phosphate bonds, significantly depend on hydration. However, the structure of the hydration shell of the ATP molecule is still a matter of discussion. In this work, the hydration shells of ATP in water and MgCl2 solutions were examined by terahertz time-domain spectroscopy and dynamic light scattering. Terahertz spectroscopy reveals the distorted water structure in the ATP water solution displaying tightly bound water molecules, which could be explained by the hydration of phosphate groups. Upon ATP binding to a Mg2+ ion, the situation is principally different: Instead of the distorted water structure, its arranged structure with increased hydrogen bond number is observed. Dynamic light scattering showed that the hydrodynamic diameter of ATP increases by 0.5 nm after Mg2+ binding. Meanwhile, according the characteristics of scattering, the increase of the shell size occurs via formation of a layer with a refraction coefficient similar to water. This layer can be interpreted as hydration shell differing from unaltered water by increased number of hydrogen bonds.

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Year:  2021        PMID: 33882673     DOI: 10.1021/acs.jpcb.1c02276

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  3 in total

1.  Relationships between Molecular Structure of Carbohydrates and Their Dynamic Hydration Shells Revealed by Terahertz Time-Domain Spectroscopy.

Authors:  Nikita V Penkov
Journal:  Int J Mol Sci       Date:  2021-11-04       Impact factor: 5.923

2.  Hydration Shells of DNA from the Point of View of Terahertz Time-Domain Spectroscopy.

Authors:  Nadezda A Penkova; Mars G Sharapov; Nikita V Penkov
Journal:  Int J Mol Sci       Date:  2021-10-14       Impact factor: 5.923

3.  Effect of Laser-Induced Optical Breakdown on the Structure of Bsa Molecules in Aqueous Solutions: An Optical Study.

Authors:  Egor I Nagaev; Ilya V Baimler; Alexey S Baryshev; Maxim E Astashev; Sergey V Gudkov
Journal:  Molecules       Date:  2022-10-10       Impact factor: 4.927

  3 in total

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