Literature DB >> 33877627

Single-Particle Cryo-EM of Membrane Proteins.

Dovile Januliene1,2, Arne Moeller3,4.   

Abstract

In the recent years, the protein databank has been fueled by the exponential growth of high-resolution electron cryo-microscopy (cryo-EM) structures. This trend will be further accelerated through the continuous software and method developments and the increasing availability of imaging centers, which will open cryo-EM to a wide array of researchers with their diverse scientific goals and questions. Especially for structural biology of membrane proteins, cryo-EM offers significant advantages as it can overcome multiple limitations of classical methods. Most importantly, in cryo-EM, the sample is prepared as a vitrified suspension, which abolishes the need for crystallization, reduces the required sample amount and allows usage of a wide arsenal of hydrophobic environments. Despite recent improvements, high-resolution cryo-EM still poses some significant challenges, and standardized procedures, especially for the characterization of membrane proteins, are missing. While there can be no ultimate recipe toward a high-resolution cryo-EM structure for every membrane protein, certain factors seem to be universally relevant. Here, we share the protocols that have been successfully used in our laboratory. We hope that this may be a useful resource to other researchers in the field and may increase their chances of success.

Keywords:  Cryo-EM; Membrane proteins; Microscopy; Negative-stain; Single-particle analysis; structural biology

Year:  2021        PMID: 33877627     DOI: 10.1007/978-1-0716-1394-8_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  58 in total

1.  Horizontal membrane-intrinsic α-helices in the stator a-subunit of an F-type ATP synthase.

Authors:  Matteo Allegretti; Niklas Klusch; Deryck J Mills; Janet Vonck; Werner Kühlbrandt; Karen M Davies
Journal:  Nature       Date:  2015-02-23       Impact factor: 49.962

Review 2.  Structure and Mechanisms of F-Type ATP Synthases.

Authors:  Werner Kühlbrandt
Journal:  Annu Rev Biochem       Date:  2019-03-22       Impact factor: 23.643

3.  The architecture of the mammalian respirasome.

Authors:  Jinke Gu; Meng Wu; Runyu Guo; Kaige Yan; Jianlin Lei; Ning Gao; Maojun Yang
Journal:  Nature       Date:  2016-09-29       Impact factor: 49.962

Review 4.  Mammalian Respiratory Complex I Through the Lens of Cryo-EM.

Authors:  Ahmed-Noor A Agip; James N Blaza; Justin G Fedor; Judy Hirst
Journal:  Annu Rev Biophys       Date:  2019-02-20       Impact factor: 12.981

5.  Structure of the human MHC-I peptide-loading complex.

Authors:  Andreas Blees; Dovile Januliene; Tommy Hofmann; Nicole Koller; Carla Schmidt; Simon Trowitzsch; Arne Moeller; Robert Tampé
Journal:  Nature       Date:  2017-11-06       Impact factor: 49.962

6.  Cryo-EM structure of the activated GLP-1 receptor in complex with a G protein.

Authors:  Yan Zhang; Bingfa Sun; Dan Feng; Hongli Hu; Matthew Chu; Qianhui Qu; Jeffrey T Tarrasch; Shane Li; Tong Sun Kobilka; Brian K Kobilka; Georgios Skiniotis
Journal:  Nature       Date:  2017-05-24       Impact factor: 49.962

7.  Atomic structure of the entire mammalian mitochondrial complex I.

Authors:  Karol Fiedorczuk; James A Letts; Gianluca Degliesposti; Karol Kaszuba; Mark Skehel; Leonid A Sazanov
Journal:  Nature       Date:  2016-09-05       Impact factor: 49.962

8.  Structure of the TRPV1 ion channel determined by electron cryo-microscopy.

Authors:  Maofu Liao; Erhu Cao; David Julius; Yifan Cheng
Journal:  Nature       Date:  2013-12-05       Impact factor: 49.962

9.  Architecture of mammalian respiratory complex I.

Authors:  Kutti R Vinothkumar; Jiapeng Zhu; Judy Hirst
Journal:  Nature       Date:  2014-09-07       Impact factor: 49.962

10.  Phase-plate cryo-EM structure of a class B GPCR-G-protein complex.

Authors:  Yi-Lynn Liang; Maryam Khoshouei; Mazdak Radjainia; Yan Zhang; Alisa Glukhova; Jeffrey Tarrasch; David M Thal; Sebastian G B Furness; George Christopoulos; Thomas Coudrat; Radostin Danev; Wolfgang Baumeister; Laurence J Miller; Arthur Christopoulos; Brian K Kobilka; Denise Wootten; Georgios Skiniotis; Patrick M Sexton
Journal:  Nature       Date:  2017-04-24       Impact factor: 49.962

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  2 in total

Review 1.  Protein Design: From the Aspect of Water Solubility and Stability.

Authors:  Rui Qing; Shilei Hao; Eva Smorodina; David Jin; Arthur Zalevsky; Shuguang Zhang
Journal:  Chem Rev       Date:  2022-08-03       Impact factor: 72.087

Review 2.  Lactococcus lactis, an Attractive Cell Factory for the Expression of Functional Membrane Proteins.

Authors:  Annie Frelet-Barrand
Journal:  Biomolecules       Date:  2022-01-22
  2 in total

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