Literature DB >> 33870090

Effective behavior of cooperative and nonidentical molecular motors.

Joseph J Klobusicky1, John Fricks2, Peter R Kramer3.   

Abstract

Analytical formulas for effective drift, diffusivity, run times, and run lengths are derived for an intracellular transport system consisting of a cargo attached to two cooperative but not identical molecular motors (for example, kinesin-1 and kinesin-2) which can each attach and detach from a microtubule. The dynamics of the motor and cargo in each phase are governed by stochastic differential equations, and the switching rates depend on the spatial configuration of the motor and cargo. This system is analyzed in a limit where the detached motors have faster dynamics than the cargo, which in turn has faster dynamics than the attached motors. The attachment and detachment rates are also taken to be slow relative to the spatial dynamics. Through an application of iterated stochastic averaging to this system, and the use of renewal-reward theory to stitch together the progress within each switching phase, we obtain explicit analytical expressions for the effective drift, diffusivity, and processivity of the motor-cargo system. Our approach accounts in particular for jumps in motor-cargo position that occur during attachment and detachment events, as the cargo tracking variable makes a rapid adjustment due to the averaged fast scales. The asymptotic formulas are in generally good agreement with direct stochastic simulations of the detailed model based on experimental parameters for various pairings of kinesin-1 and kinesin-2 under assisting, hindering, or no load.

Entities:  

Keywords:  Molecular motors; Renewal-reward theory; Stochastic averaging; Switched diffusion

Year:  2020        PMID: 33870090      PMCID: PMC8049358          DOI: 10.1007/s40687-020-00230-7

Source DB:  PubMed          Journal:  Res Math Sci        ISSN: 2197-9847


  66 in total

1.  Two kinesins transport cargo primarily via the action of one motor: implications for intracellular transport.

Authors:  D Kenneth Jamison; Jonathan W Driver; Arthur R Rogers; Pamela E Constantinou; Michael R Diehl
Journal:  Biophys J       Date:  2010-11-03       Impact factor: 4.033

2.  Topological effects on dynamics in complex pulse-coupled networks of integrate-and-fire type.

Authors:  Maxim S Shkarayev; Gregor Kovačič; David Cai
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-03-12

3.  The load dependence of kinesin's mechanical cycle.

Authors:  C M Coppin; D W Pierce; L Hsu; R D Vale
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-05       Impact factor: 11.205

4.  Temporal cooperativity of motor proteins under constant force: insights from Kramers' escape problem.

Authors:  Balaramamahanti Srinivas; Manoj Gopalakrishnan
Journal:  Phys Biol       Date:  2018-12-07       Impact factor: 2.583

Review 5.  Bidirectional cargo transport: moving beyond tug of war.

Authors:  William O Hancock
Journal:  Nat Rev Mol Cell Biol       Date:  2014-08-16       Impact factor: 94.444

6.  Dimerization of mammalian kinesin-3 motors results in superprocessive motion.

Authors:  Virupakshi Soppina; Stephen R Norris; Aslan S Dizaji; Matt Kortus; Sarah Veatch; Michelle Peckham; Kristen J Verhey
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-02       Impact factor: 11.205

7.  Coordinated hydrolysis explains the mechanical behavior of kinesin.

Authors:  C S Peskin; G Oster
Journal:  Biophys J       Date:  1995-04       Impact factor: 4.033

8.  The Mechanochemical Cycle of Mammalian Kinesin-2 KIF3A/B under Load.

Authors:  Johan O L Andreasson; Shankar Shastry; William O Hancock; Steven M Block
Journal:  Curr Biol       Date:  2015-04-09       Impact factor: 10.834

9.  Stepping, strain gating, and an unexpected force-velocity curve for multiple-motor-based transport.

Authors:  Ambarish Kunwar; Michael Vershinin; Jing Xu; Steven P Gross
Journal:  Curr Biol       Date:  2008-08-14       Impact factor: 10.834

10.  Myosin Va molecular motors manoeuvre liposome cargo through suspended actin filament intersections in vitro.

Authors:  Andrew T Lombardo; Shane R Nelson; M Yusuf Ali; Guy G Kennedy; Kathleen M Trybus; Sam Walcott; David M Warshaw
Journal:  Nat Commun       Date:  2017-06-01       Impact factor: 14.919

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