Literature DB >> 33868771

Hierarchical Adaptive Multi-task Learning Framework for Patient Diagnoses and Diagnostic Category Classification.

Salim Malakouti1, Milos Hauskrecht1.   

Abstract

The problems a patient suffers from can be summarized in terms of a list of patient diagnoses. The diagnoses are typically organized in a hierarchy (or a lattice structure) in which many different low-level diagnoses are covered by one or more diagnostic categories. An interesting machine learning problem is related to learning of a wide range of diagnostic models (at different levels of abstraction) that can automatically assign a diagnosis or a diagnostic category to a specific patient. While one can always approach this problem by learning models for each diagnostic task independently, an interesting open question is how one can leverage the knowledge of a diagnostic hierarchy to improve the classification and outperform independent diagnostic models. In this work, we study this problem by designing a new hierarchical classification learning framework in which multiple diagnostic classification targets are explicitly related via diagnostic hierarchy relations. By conducting experiments on MIMIC-III data and ICD-9 diagnosis hierarchy, we demonstrate that our framework leads to improved classification performance on individual diagnostic tasks when compared to independently learned diagnostic models. This improvement is stronger for diagnoses with a low prior and smaller number of positive training examples.

Entities:  

Keywords:  Diagnosis Prediction; ICD-9; Machine Learning; Multitask Learning; Transfer Learning

Year:  2020        PMID: 33868771      PMCID: PMC8049628          DOI: 10.1109/bibm47256.2019.8983298

Source DB:  PubMed          Journal:  Proceedings (IEEE Int Conf Bioinformatics Biomed)        ISSN: 2156-1125


  10 in total

1.  True path rule hierarchical ensembles for genome-wide gene function prediction.

Authors:  Giorgio Valentini
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2011 May-Jun       Impact factor: 3.710

2.  Automating the assignment of diagnosis codes to patient encounters using example-based and machine learning techniques.

Authors:  Serguei V S Pakhomov; James D Buntrock; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2006-06-23       Impact factor: 4.497

3.  GRAM: Graph-based Attention Model for Healthcare Representation Learning.

Authors:  Edward Choi; Mohammad Taha Bahadori; Le Song; Walter F Stewart; Jimeng Sun
Journal:  KDD       Date:  2017-08

4.  The International Classification of Diseases: ninth revision (ICD-9)

Authors:  V N Slee
Journal:  Ann Intern Med       Date:  1978-03       Impact factor: 25.391

5.  Hierarchical Clustering Multi-Task Learning for Joint Human Action Grouping and Recognition.

Authors:  An-An Liu; Yu-Ting Su; Wei-Zhi Nie; Mohan Kankanhalli
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2016-03-02       Impact factor: 6.226

6.  Predicting patient's diagnoses and diagnostic categories from clinical-events in EHR data.

Authors:  Seyedsalim Malakouti; Milos Hauskrecht
Journal:  Artif Intell Med Conf Artif Intell Med (2005-)       Date:  2019-05-30

7.  Recent Context-aware LSTM for Clinical Event Time-series Prediction.

Authors:  Jeong Min Lee; Milos Hauskrecht
Journal:  Artif Intell Med Conf Artif Intell Med (2005-)       Date:  2019-05-30

8.  Deep Patient: An Unsupervised Representation to Predict the Future of Patients from the Electronic Health Records.

Authors:  Riccardo Miotto; Li Li; Brian A Kidd; Joel T Dudley
Journal:  Sci Rep       Date:  2016-05-17       Impact factor: 4.379

9.  Diagnosis code assignment: models and evaluation metrics.

Authors:  Adler Perotte; Rimma Pivovarov; Karthik Natarajan; Nicole Weiskopf; Frank Wood; Noémie Elhadad
Journal:  J Am Med Inform Assoc       Date:  2013-12-02       Impact factor: 4.497

10.  MIMIC-III, a freely accessible critical care database.

Authors:  Alistair E W Johnson; Tom J Pollard; Lu Shen; Li-Wei H Lehman; Mengling Feng; Mohammad Ghassemi; Benjamin Moody; Peter Szolovits; Leo Anthony Celi; Roger G Mark
Journal:  Sci Data       Date:  2016-05-24       Impact factor: 6.444

  10 in total
  1 in total

1.  Neural Clinical Event Sequence Prediction through Personalized Online Adaptive Learning.

Authors:  Jeong Min Lee; Milos Hauskrecht
Journal:  Artif Intell Med Conf Artif Intell Med (2005-)       Date:  2021-06-08
  1 in total

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