Literature DB >> 33861200

Real-Time Clinical Decision Support Based on Recurrent Neural Networks for In-Hospital Acute Kidney Injury: External Validation and Model Interpretation.

Kipyo Kim1, Hyeonsik Yang2, Jinyeong Yi3, Hyung-Eun Son4, Ji-Young Ryu4, Yong Chul Kim5, Jong Cheol Jeong4, Ho Jun Chin4, Ki Young Na4, Dong-Wan Chae4, Seung Seok Han5, Sejoong Kim4,6.   

Abstract

BACKGROUND: Acute kidney injury (AKI) is commonly encountered in clinical practice and is associated with poor patient outcomes and increased health care costs. Despite it posing significant challenges for clinicians, effective measures for AKI prediction and prevention are lacking. Previously published AKI prediction models mostly have a simple design without external validation. Furthermore, little is known about the process of linking model output and clinical decisions due to the black-box nature of neural network models.
OBJECTIVE: We aimed to present an externally validated recurrent neural network (RNN)-based continuous prediction model for in-hospital AKI and show applicable model interpretations in relation to clinical decision support.
METHODS: Study populations were all patients aged 18 years or older who were hospitalized for more than 48 hours between 2013 and 2017 in 2 tertiary hospitals in Korea (Seoul National University Bundang Hospital and Seoul National University Hospital). All demographic data, laboratory values, vital signs, and clinical conditions of patients were obtained from electronic health records of each hospital. We developed 2-stage hierarchical prediction models (model 1 and model 2) using RNN algorithms. The outcome variable for model 1 was the occurrence of AKI within 7 days from the present. Model 2 predicted the future trajectory of creatinine values up to 72 hours. The performance of each developed model was evaluated using the internal and external validation data sets. For the explainability of our models, different model-agnostic interpretation methods were used, including Shapley Additive Explanations, partial dependence plots, individual conditional expectation, and accumulated local effects plots.
RESULTS: We included 69,081 patients in the training, 7675 in the internal validation, and 72,352 in the external validation cohorts for model development after excluding cases with missing data and those with an estimated glomerular filtration rate less than 15 mL/min/1.73 m2 or end-stage kidney disease. Model 1 predicted any AKI development with an area under the receiver operating characteristic curve (AUC) of 0.88 (internal validation) and 0.84 (external validation), and stage 2 or higher AKI development with an AUC of 0.93 (internal validation) and 0.90 (external validation). Model 2 predicted the future creatinine values within 3 days with mean-squared errors of 0.04-0.09 for patients with higher risks of AKI and 0.03-0.08 for those with lower risks. Based on the developed models, we showed AKI probability according to feature values in total patients and each individual with partial dependence, accumulated local effects, and individual conditional expectation plots. We also estimated the effects of feature modifications such as nephrotoxic drug discontinuation on future creatinine levels.
CONCLUSIONS: We developed and externally validated a continuous AKI prediction model using RNN algorithms. Our model could provide real-time assessment of future AKI occurrences and individualized risk factors for AKI in general inpatient cohorts; thus, we suggest approaches to support clinical decisions based on prediction models for in-hospital AKI. ©Kipyo Kim, Hyeonsik Yang, Jinyeong Yi, Hyung-Eun Son, Ji-Young Ryu, Yong Chul Kim, Jong Cheol Jeong, Ho Jun Chin, Ki Young Na, Dong-Wan Chae, Seung Seok Han, Sejoong Kim. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 16.04.2021.

Entities:  

Keywords:  acute kidney injury; external validation; internal validation; kidney; neural networks; prediction model; recurrent neural network

Year:  2021        PMID: 33861200     DOI: 10.2196/24120

Source DB:  PubMed          Journal:  J Med Internet Res        ISSN: 1438-8871            Impact factor:   5.428


  2 in total

1.  Daily estimates of individual discharge likelihood with deep learning natural language processing in general medicine: a prospective and external validation study.

Authors:  Stephen Bacchi; Toby Gilbert; Samuel Gluck; Joy Cheng; Yiran Tan; Ivana Chim; Jim Jannes; Timothy Kleinig; Simon Koblar
Journal:  Intern Emerg Med       Date:  2021-07-31       Impact factor: 3.397

2.  Machine learning for early discrimination between transient and persistent acute kidney injury in critically ill patients with sepsis.

Authors:  Xiao-Qin Luo; Ping Yan; Ning-Ya Zhang; Bei Luo; Mei Wang; Ying-Hao Deng; Ting Wu; Xi Wu; Qian Liu; Hong-Shen Wang; Lin Wang; Yi-Xin Kang; Shao-Bin Duan
Journal:  Sci Rep       Date:  2021-10-12       Impact factor: 4.379

  2 in total

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