Literature DB >> 33860288

Surface-based Tracking of U-fibers in the Superficial White Matter.

Jin Kyu Gahm1, Yonggang Shi1.   

Abstract

The superficial white matter (SWM) lies directly underneath the cortical ribbon and contains the short association fibers, or U-fibers, that connect neighboring gyri. Connectivity of these U-fibers is important for various neuroscientific research from the development to the aging of the brain. Nonetheless, conventional tractography methods can only provide a partial representation of these connections. Moreover, previous studies on U-fibers mainly extract tracts based on their shape characteristics without imposing the biologically critical condition that they should tightly follow the cortical surface. In this work we leverage the high resolution diffusion imaging data from the Human Connectome Project (HCP), and develop a novel surface-based framework for reconstructing the U-fibers. Guided by the projected fiber orientation distributions (FODs) on cortical surfaces, our method tracks the U-fibers from sulcal seed regions to neighboring gyrus on the triangular mesh representation of the cortex. Compared to volume-based tractography, the main advantage of our method is that it is intrinsic to the cortical geometry. More specifically, we define a novel approach for measuring the change of angles on the tangent space of the surface and use them to determine the U-fiber passing through a sulcal seed point. In experimental results, we compare our surface-based method with state-of-the-art FOD-based tractography from MRtrix on a large-scale dataset of 484 HCP subjects, and demonstrate that our method clearly achieves superior performance on the reconstruction of U-fibers between the precentral and postcentral gyrus.

Entities:  

Year:  2019        PMID: 33860288      PMCID: PMC8046261     

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  19 in total

1.  Hamilton-Jacobi skeleton on cortical surfaces.

Authors:  Y Shi; P M Thompson; I Dinov; A W Toga
Journal:  IEEE Trans Med Imaging       Date:  2008-05       Impact factor: 10.048

2.  Cortical surface-based analysis. I. Segmentation and surface reconstruction.

Authors:  A M Dale; B Fischl; M I Sereno
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

3.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

4.  Superficial white matter as a novel substrate of age-related cognitive decline.

Authors:  Arash Nazeri; M Mallar Chakravarty; Tarek K Rajji; Daniel Felsky; David J Rotenberg; Mikko Mason; Li N Xu; Nancy J Lobaugh; Benoit H Mulsant; Aristotle N Voineskos
Journal:  Neurobiol Aging       Date:  2015-02-27       Impact factor: 4.673

5.  Local structural connectivity is associated with social cognition in autism spectrum disorder.

Authors:  Marc-Antoine d'Albis; Pamela Guevara; Miguel Guevara; Charles Laidi; Jennifer Boisgontier; Samuel Sarrazin; Delphine Duclap; Richard Delorme; Federico Bolognani; Christian Czech; Céline Bouquet; Myriam Ly-Le Moal; Stefan Holiga; Anouck Amestoy; Isabelle Scheid; Alexandru Gaman; Marion Leboyer; Cyril Poupon; Jean-François Mangin; Josselin Houenou
Journal:  Brain       Date:  2018-12-01       Impact factor: 13.501

6.  Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space.

Authors:  Jin Kyu Gahm; Yonggang Shi
Journal:  Med Image Anal       Date:  2018-03-16       Impact factor: 8.545

7.  Fiber Orientation and Compartment Parameter Estimation From Multi-Shell Diffusion Imaging.

Authors:  Giang Tran; Yonggang Shi
Journal:  IEEE Trans Med Imaging       Date:  2015-05-07       Impact factor: 10.048

8.  Alterations of superficial white matter in schizophrenia and relationship to cognitive performance.

Authors:  Arash Nazeri; M Mallar Chakravarty; Daniel Felsky; Nancy J Lobaugh; Tarek K Rajji; Benoit H Mulsant; Aristotle N Voineskos
Journal:  Neuropsychopharmacology       Date:  2013-04-16       Impact factor: 7.853

9.  Development of superficial white matter and its structural interplay with cortical gray matter in children and adolescents.

Authors:  Minjie Wu; Lisa H Lu; Allison Lowes; Shaolin Yang; Alessandra M Passarotti; Xiaohong J Zhou; Mani N Pavuluri
Journal:  Hum Brain Mapp       Date:  2013-09-13       Impact factor: 5.038

10.  The challenge of mapping the human connectome based on diffusion tractography.

Authors:  Klaus H Maier-Hein; Peter F Neher; Jean-Christophe Houde; Marc-Alexandre Côté; Eleftherios Garyfallidis; Jidan Zhong; Maxime Chamberland; Fang-Cheng Yeh; Ying-Chia Lin; Qing Ji; Wilburn E Reddick; John O Glass; David Qixiang Chen; Yuanjing Feng; Chengfeng Gao; Ye Wu; Jieyan Ma; Renjie He; Qiang Li; Carl-Fredrik Westin; Samuel Deslauriers-Gauthier; J Omar Ocegueda González; Michael Paquette; Samuel St-Jean; Gabriel Girard; François Rheault; Jasmeen Sidhu; Chantal M W Tax; Fenghua Guo; Hamed Y Mesri; Szabolcs Dávid; Martijn Froeling; Anneriet M Heemskerk; Alexander Leemans; Arnaud Boré; Basile Pinsard; Christophe Bedetti; Matthieu Desrosiers; Simona Brambati; Julien Doyon; Alessia Sarica; Roberta Vasta; Antonio Cerasa; Aldo Quattrone; Jason Yeatman; Ali R Khan; Wes Hodges; Simon Alexander; David Romascano; Muhamed Barakovic; Anna Auría; Oscar Esteban; Alia Lemkaddem; Jean-Philippe Thiran; H Ertan Cetingul; Benjamin L Odry; Boris Mailhe; Mariappan S Nadar; Fabrizio Pizzagalli; Gautam Prasad; Julio E Villalon-Reina; Justin Galvis; Paul M Thompson; Francisco De Santiago Requejo; Pedro Luque Laguna; Luis Miguel Lacerda; Rachel Barrett; Flavio Dell'Acqua; Marco Catani; Laurent Petit; Emmanuel Caruyer; Alessandro Daducci; Tim B Dyrby; Tim Holland-Letz; Claus C Hilgetag; Bram Stieltjes; Maxime Descoteaux
Journal:  Nat Commun       Date:  2017-11-07       Impact factor: 14.919

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