Literature DB >> 33854286

Phenomics, genomics of oil palm (Elaeis guineensis Jacq.): way forward for making sustainable and high yielding quality oil palm.

B Kalyana Babu1, R K Mathur1, P Anitha1, G Ravichandran1, H P Bhagya1.   

Abstract

Oil palm (Elaeis guineensis Jacq.) is a heterogeneous, perennial crop having long breeding cycle with a genome size of 1.8 Gb. The demand for vegetable oil is steadily increasing, and expected that nearly 240-250 million tons of vegetable oil may be required by 2050. Genomics and next generation technologies plays crucial role in achieving the sustainable availability of oil palm with good yield and high quality. A successful breeding programme in oil palm depends on the availability of diverse gene pool, ex-situ conservation and their proper utilization for generating elite planting material. The major breeding methods adopted in oil palm are either modified recurrent selection or the modified reciprocal recurrent selection method. The QTLs of yield and related traits are chiefly located on chromosome 4, 10, 12 and 15 which is discussed in the current review. The probable chromosomal regions influencing the less height increment is observed to be on chromosomes 4, 10, 14 and 15. Advanced genomic approaches together with bioinformatics tools were discussed thoroughly for achieving sustainable oil palm where more efforts are needed. Major emphasis is given on oil palm crop improvement using holistic approaches of various genomic tools. Also a road map given on the milestones in the genomics and way forward for making oil palm to high yielding quality oil palm. © Prof. H.S. Srivastava Foundation for Science and Society 2021.

Entities:  

Keywords:  Elaeis guineensis; Genomic selection; Genomics assisted breeding; High yielding quality oil palm; Speed breeding

Year:  2021        PMID: 33854286      PMCID: PMC7981377          DOI: 10.1007/s12298-021-00964-w

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  61 in total

1.  Marker assisted selection of bacterial blight resistance genes in rice.

Authors:  A P Davierwala; A P Reddy; M D Lagu; P K Ranjekar; V S Gupta
Journal:  Biochem Genet       Date:  2001-08       Impact factor: 1.890

2.  Palm oil and cardiovascular disease: a randomized trial of the effects of hybrid palm oil supplementation on human plasma lipid patterns.

Authors:  P Lucci; M Borrero; A Ruiz; D Pacetti; N G Frega; O Diez; M Ojeda; R Gagliardi; L Parra; M Angel
Journal:  Food Funct       Date:  2016-01       Impact factor: 5.396

3.  SSR mining in oil palm EST database: application in oil palm germplasm diversity studies.

Authors:  Ngoot-Chin Ting; Noorhariza Mohd Zaki; Rozana Rosli; Eng-Ti Leslie Low; Maizura Ithnin; Suan-Choo Cheah; Soon-Guan Tan; Rajinder Singh
Journal:  J Genet       Date:  2010-08       Impact factor: 1.166

4.  Expression profiles of putative defence-related proteins in oil palm (Elaeis guineensis) colonized by Ganoderma boninense.

Authors:  Yung-Chie Tan; Keat-Ai Yeoh; Mui-Yun Wong; Chai-Ling Ho
Journal:  J Plant Physiol       Date:  2013-06-13       Impact factor: 3.549

5.  RNA-seq analysis of oil palm under cold stress reveals a different C-repeat binding factor (CBF) mediated gene expression pattern in Elaeis guineensis compared to other species.

Authors:  Xintao Lei; Yong Xiao; Wei Xia; Annaliese S Mason; Yaodong Yang; Zilong Ma; Ming Peng
Journal:  PLoS One       Date:  2014-12-05       Impact factor: 3.240

6.  A consensus linkage map of oil palm and a major QTL for stem height.

Authors:  May Lee; Jun Hong Xia; Zhongwei Zou; Jian Ye; Yuzer Alfiko; Jingjing Jin; Jessica Virginia Lieando; Maria Indah Purnamasari; Chin Huat Lim; Antonius Suwanto; Limsoon Wong; Nam-Hai Chua; Gen Hua Yue
Journal:  Sci Rep       Date:  2015-02-04       Impact factor: 4.379

7.  Development, identification and validation of CAPS marker for SHELL trait which governs dura, pisifera and tenera fruit forms in oil palm (Elaeis guineensis Jacq.).

Authors:  B Kalyana Babu; R K Mathur; P Naveen Kumar; D Ramajayam; G Ravichandran; M V B Venu; S Sparjan Babu
Journal:  PLoS One       Date:  2017-02-13       Impact factor: 3.240

8.  Draft Genome Sequence of the Phytopathogenic Fungus Ganoderma boninense, the Causal Agent of Basal Stem Rot Disease on Oil Palm.

Authors:  Condro Utomo; Zulfikar Achmad Tanjung; Redi Aditama; Rika Fithri Nurani Buana; Antonius Dony Madu Pratomo; Reno Tryono; Tony Liwang
Journal:  Genome Announc       Date:  2018-04-26

9.  A method for the production and expedient screening of CRISPR/Cas9-mediated non-transgenic mutant plants.

Authors:  Longzheng Chen; Wei Li; Lorenzo Katin-Grazzini; Jing Ding; Xianbin Gu; Yanjun Li; Tingting Gu; Ren Wang; Xinchun Lin; Ziniu Deng; Richard J McAvoy; Frederick G Gmitter; Zhanao Deng; Yunde Zhao; Yi Li
Journal:  Hortic Res       Date:  2018-03-02       Impact factor: 6.793

10.  Association Mapping Between Candidate Gene SNP and Production and Oil Quality Traits in Interspecific Oil Palm Hybrids.

Authors:  Maider Astorkia; Mónica Hernandez; Stéphanie Bocs; Emma Lopez de Armentia; Ana Herran; Kevin Ponce; Olga León; Shone Morales; Nathalie Quezada; Francisco Orellana; Fahmi Wendra; Zulhermana Sembiring; Dwi Asmono; Enrique Ritter
Journal:  Plants (Basel)       Date:  2019-09-26
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