Literature DB >> 33854129

Detecting network anomalies using Forman-Ricci curvature and a case study for human brain networks.

Tanima Chatterjee1, Réka Albert2, Stuti Thapliyal1, Nazanin Azarhooshang1, Bhaskar DasGupta3.   

Abstract

We analyze networks of functional correlations between brain regions to identify changes in their structure caused by Attention Deficit Hyperactivity Disorder (ADHD). We express the task for finding changes as a network anomaly detection problem on temporal networks. We propose the use of a curvature measure based on the Forman-Ricci curvature, which expresses higher-order correlations among two connected nodes. Our theoretical result on comparing this Forman-Ricci curvature with another well-known notion of network curvature, namely the Ollivier-Ricci curvature, lends further justification to the assertions that these two notions of network curvatures are not well correlated and therefore one of these curvature measures cannot be used as an universal substitute for the other measure. Our experimental results indicate nine critical edges whose curvature differs dramatically in brains of ADHD patients compared to healthy brains. The importance of these edges is supported by existing neuroscience evidence. We demonstrate that comparative analysis of curvature identifies changes that more traditional approaches, for example analysis of edge weights, would not be able to identify.

Entities:  

Year:  2021        PMID: 33854129      PMCID: PMC8046810          DOI: 10.1038/s41598-021-87587-z

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  24 in total

1.  Network motifs in the transcriptional regulation network of Escherichia coli.

Authors:  Shai S Shen-Orr; Ron Milo; Shmoolik Mangan; Uri Alon
Journal:  Nat Genet       Date:  2002-04-22       Impact factor: 38.330

2.  A small world of weak ties provides optimal global integration of self-similar modules in functional brain networks.

Authors:  Lazaros K Gallos; Hernán A Makse; Mariano Sigman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-03       Impact factor: 11.205

3.  Computationally efficient measure of topological redundancy of biological and social networks.

Authors:  Réka Albert; Bhaskar DasGupta; Rashmi Hegde; Gowri Sangeetha Sivanathan; Anthony Gitter; Gamze Gürsoy; Pradyut Paul; Eduardo Sontag
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-09-29

4.  Distributed and causal influence of frontal operculum in task control.

Authors:  Takayasu Higo; Rogier B Mars; Erie D Boorman; Ethan R Buch; Matthew F S Rushworth
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-22       Impact factor: 11.205

5.  Hyperbolic geometry of complex networks.

Authors:  Dmitri Krioukov; Fragkiskos Papadopoulos; Maksim Kitsak; Amin Vahdat; Marián Boguñá
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-09-09

Review 6.  Modular Brain Networks.

Authors:  Olaf Sporns; Richard F Betzel
Journal:  Annu Rev Psychol       Date:  2015-09-21       Impact factor: 24.137

7.  Evolving functional network properties and synchronizability during human epileptic seizures.

Authors:  Kaspar A Schindler; Stephan Bialonski; Marie-Therese Horstmann; Christian E Elger; Klaus Lehnertz
Journal:  Chaos       Date:  2008-09       Impact factor: 3.642

8.  Automatic change detection in multimodal serial MRI: application to multiple sclerosis lesion evolution.

Authors:  Marcel Bosc; Fabrice Heitz; Jean Paul Armspach; Izzie Namer; Daniel Gounot; Lucien Rumbach
Journal:  Neuroimage       Date:  2003-10       Impact factor: 6.556

9.  Comparative analysis of two discretizations of Ricci curvature for complex networks.

Authors:  Areejit Samal; R P Sreejith; Jiao Gu; Shiping Liu; Emil Saucan; Jürgen Jost
Journal:  Sci Rep       Date:  2018-06-05       Impact factor: 4.379

10.  Measuring robustness of brain networks in autism spectrum disorder with Ricci curvature.

Authors:  Anish K Simhal; Kimberly L H Carpenter; Saad Nadeem; Joanne Kurtzberg; Allen Song; Allen Tannenbaum; Guillermo Sapiro; Geraldine Dawson
Journal:  Sci Rep       Date:  2020-07-02       Impact factor: 4.379

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  1 in total

1.  Graph Ricci curvatures reveal atypical functional connectivity in autism spectrum disorder.

Authors:  Pavithra Elumalai; Yasharth Yadav; Nitin Williams; Emil Saucan; Jürgen Jost; Areejit Samal
Journal:  Sci Rep       Date:  2022-05-18       Impact factor: 4.996

  1 in total

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