Literature DB >> 33852134

A Measure of Concurrent Neural Firing Activity Based on Mutual Information.

Gorana Mijatovic1, Tatjana Loncar-Turukalo2, Nebojsa Bozanic3, Nina Milosavljevic4, Riccardo Storchi4, Luca Faes5.   

Abstract

Multiple methods have been developed in an attempt to quantify stimulus-induced neural coordination and to understand internal coordination of neuronal responses by examining the synchronization phenomena in neural discharge patterns. In this work we propose a novel approach to estimate the degree of concomitant firing between two neural units, based on a modified form of mutual information (MI) applied to a two-state representation of the firing activity. The binary profile of each single unit unfolds its discharge activity in time by decomposition into the state of neural quiescence/low activity and state of moderate firing/bursting. Then, the MI computed between the two binary streams is normalized by their minimum entropy and is taken as positive or negative depending on the prevalence of identical or opposite concomitant states. The resulting measure, denoted as Concurrent Firing Index based on MI (CFIMI), relies on a single input parameter and is otherwise assumption-free and symmetric. Exhaustive validation was carried out through controlled experiments in three simulation scenarios, showing that CFIMI is independent on firing rate and recording duration, and is sensitive to correlated and anti-correlated firing patterns. Its ability to detect non-correlated activity was assessed using ad-hoc surrogate data. Moreover, the evaluation of CFIMI on experimental recordings of spiking activity in retinal ganglion cells brought insights into the changes of neural synchrony over time. The proposed measure offers a novel perspective on the estimation of neural synchrony, providing information on the co-occurrence of firing states in the two analyzed trains over longer temporal scales compared to existing measures.

Keywords:  Concurrent activity; Correlation; Firing patterns; Mutual information; Neural synchrony

Year:  2021        PMID: 33852134     DOI: 10.1007/s12021-021-09515-w

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  27 in total

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Authors:  Emery N Brown; Robert E Kass; Partha P Mitra
Journal:  Nat Neurosci       Date:  2004-05       Impact factor: 24.884

2.  Synchronized retinal oscillations encode essential information for escape behavior in frogs.

Authors:  Hiroshi Ishikane; Mie Gangi; Shoko Honda; Masao Tachibana
Journal:  Nat Neurosci       Date:  2005-07-03       Impact factor: 24.884

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Authors:  Tim Gollisch; Markus Meister
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Authors:  E M Izhikevich
Journal:  IEEE Trans Neural Netw       Date:  2003

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Authors:  Daniel Kerschensteiner; Rachel O L Wong
Journal:  Neuron       Date:  2008-06-26       Impact factor: 17.173

6.  Mechanisms of concerted firing among retinal ganglion cells.

Authors:  I H Brivanlou; D K Warland; M Meister
Journal:  Neuron       Date:  1998-03       Impact factor: 17.173

7.  Detecting pairwise correlations in spike trains: an objective comparison of methods and application to the study of retinal waves.

Authors:  Catherine S Cutts; Stephen J Eglen
Journal:  J Neurosci       Date:  2014-10-22       Impact factor: 6.167

8.  Symbolic dynamics of heart rate variability: a probe to investigate cardiac autonomic modulation.

Authors:  Stefano Guzzetti; Ester Borroni; Pietro E Garbelli; Elisa Ceriani; Paolo Della Bella; Nicola Montano; Chiara Cogliati; Virend K Somers; Alberto Malliani; Alberto Mallani; Alberto Porta
Journal:  Circulation       Date:  2005-07-18       Impact factor: 29.690

Review 9.  Reliability, synchrony and noise.

Authors:  G Bard Ermentrout; Roberto F Galán; Nathaniel N Urban
Journal:  Trends Neurosci       Date:  2008-07-05       Impact factor: 13.837

10.  Melanopsin Contributions to the Representation of Images in the Early Visual System.

Authors:  Annette E Allen; Riccardo Storchi; Franck P Martial; Robert A Bedford; Robert J Lucas
Journal:  Curr Biol       Date:  2017-05-18       Impact factor: 10.834

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