Edward R H Walter1,2, Ying Ge2, Justin C Mason2, Joseph J Boyle2, Nicholas J Long1. 1. Department of Chemistry, Imperial College London, Molecular Sciences Research Hub, White City Campus, Wood Lane, London W12 0BZ, U.K. 2. National Lung and Heart Institute, Imperial College London, Du Cane Road, London W12 0NN, U.K.
Abstract
Heme oxygenase-1 (HO-1) is a vital enzyme in humans that primarily regulates free heme concentrations. The overexpression of HO-1 is commonly associated with cardiovascular and neurodegenerative diseases including atherosclerosis and ischemic stroke. Currently, there are no known chemical probes to detect HO-1 activity, limiting its potential as an early diagnostic/prognostic marker in these serious diseases. Reported here are the design, synthesis, and photophysical and biological characterization of a coumarin-porphyrin FRET break-apart probe to detect HO-1 activity, Fe-L1. We designed Fe-L1 to "break-apart" upon HO-1-catalyzed porphyrin degradation, perturbing the efficient FRET mechanism from a coumarin donor to a porphyrin acceptor fluorophore. Analysis of HO-1 activity using Escherichia coli lysates overexpressing hHO-1 found that a 6-fold increase in emission intensity at 383 nm was observed following incubation with NADPH. The identities of the degradation products following catabolism were confirmed by MALDI-MS and LC-MS, showing that porphyrin catabolism was regioselective at the α-position. Finally, through the analysis of Fe-L2, we have shown that close structural analogues of heme are required to maintain HO-1 activity. It is anticipated that this work will act as a foundation to design and develop new probes for HO-1 activity in the future, moving toward applications of live fluorescent imaging.
Heme oxygenase-1 (HO-1) is a vital enzyme in humans that primarily regulates free heme concentrations. The overexpression of HO-1 is commonly associated with cardiovascular and neurodegenerative diseases including atherosclerosis and ischemic stroke. Currently, there are no known chemical probes to detect HO-1 activity, limiting its potential as an early diagnostic/prognostic marker in these serious diseases. Reported here are the design, synthesis, and photophysical and biological characterization of a coumarin-porphyrin FRET break-apart probe to detect HO-1 activity, Fe-L1. We designed Fe-L1 to "break-apart" upon HO-1-catalyzed porphyrin degradation, perturbing the efficient FRET mechanism from a coumarin donor to a porphyrin acceptor fluorophore. Analysis of HO-1 activity using Escherichia coli lysates overexpressing hHO-1 found that a 6-fold increase in emission intensity at 383 nm was observed following incubation with NADPH. The identities of the degradation products following catabolism were confirmed by MALDI-MS and LC-MS, showing that porphyrin catabolism was regioselective at the α-position. Finally, through the analysis of Fe-L2, we have shown that close structural analogues of heme are required to maintain HO-1 activity. It is anticipated that this work will act as a foundation to design and develop new probes for HO-1 activity in the future, moving toward applications of live fluorescent imaging.
Heme oxygenase (HO)
is an important homeostatic microsomal enzyme
in vascular biology and cell signaling. There are two active mammalian
isoforms, namely HO-1 and HO-2, encoded by the HMOX1 and HMOX2 genes, respectively. The primary role
of HO is to prevent the accumulation of cytotoxic “free”
heme (Fe-PPIX),[1,2] which has the potential to act
as a Fenton catalyst in vivo, leading to the generation
of reactive oxygen species. (The term “free” denotes
heme that is not bound to proteins, either because it is newly synthesized
and not yet incorporated into hemoproteins or it has been released
from hemoproteins during oxidative stress.[68]) Heme catabolism is a three-step reaction that requires molecular
oxygen, NADPH, and cytochrome p450 reductase (Figure ).[3,4] During the process,
the porphyrin ring is regioselectively decyclized at the α-carbon
atom to form α-biliverdin, with the loss of carbon monoxide
(CO) and ferrous iron (Fe2+). Biliverdin is further converted
to bilirubin by biliverdin reductase (BVR) in the cytosol.[5] Both isoforms catalyze heme degradation.[6] However, HO-1 is the only isoform that is induced
by cellular stress stimuli in the body and has a defensive role in
a number of diseases including atherosclerosis[7,8] and
some cancers.[9−11]
Figure 1
HO-1 catabolism of “free” heme.
HO-1 catabolism of “free” heme.Each of the byproducts of heme degradation is known to be
cytoprotective.
For example, Fe2+ is chelated by ferritin, where it is
safely stored out of Fenton activity, and a number of studies have
demonstrated that CO is an essential intracellular signaling molecule,
activating the KATP ion channel[12] and suppressing endothelial cell apoptosis.[13,14] Finally, bilirubin has also been proven to display antioxidant properties.[15] Individuals with bilirubin concentrations above
basal levels, in genetic disorders such as Gilbert syndrome, are significantly
less likely to develop cardiovascular disease over their lifetime.[16]HO-1 plays a protective role in atherosclerosis,
a leading cause
of death in the western world. Defined by the gradual buildup of plaque
on the artery walls, atherosclerosis has no symptoms in its mild form
but, dangerously, over time can lead to the onset of ischemic stroke[17,18] and coronary artery disease.[19] In atherosclerosis,
HO-1 is induced during intraplaque hemorrhage (IPH), a rupture of
the vulnerable plaque coating the artery walls. IPH is an atheroaccelerant,
releasing cholesterol-enriched membrane lipids and hemoglobin into
the plaque interior.[20] In turn, IPH leads
to the development of more advanced vulnerable plaques and can further
lead to the development of blood clots, restricting the blood flow
to the heart and the brain.Fluorescence imaging is a powerful,
noninvasive imaging modality
used in cell biology.[21−23] Its high sensitivity and spatial resolution allow
for the detection of a variety of biological targets.[24,25] Fluorescence resonance energy transfer (FRET) is a distance-dependent
dipolar interaction between two fluorophores that can unlock detailed
information on the nanometer scale.[26] The
process is characterized by a nonradiative energy transfer from a
donor fluorophore to an acceptor, providing there is a good spectral
overlap between the donor emission and acceptor absorbance spectrum
and they are close enough in space.Over the years, FRET probes
have been designed to detect numerous
biological processes including protein folding,[26] labile pools of biologically relevant metal ions,[27,28] peroxynitrate anions,[29] and “free”
heme.[30−32] The biosensing of enzyme activity by ratiometric
“break-apart” probes has enabled enzyme activity to
be detected in real-time.[33−35] Many of these probes are peptide-based,
sensing cutting enzymes such as caspase-3,[36] and recently, an alternative method has been developed enabling
a “labeling after recognition” strategy to be utilized
effectively.[37]There are no known
chemical probes to detect HO-1 enzyme activity.
Current enzyme assays are long and cumbersome processes, and most
do not allow real-time kinetic measurements. The development of a
fluorescent chemical probe to detect HO-1 will, therefore, significantly
move the field forward. Such an advancement will enable the detection
of IPH and potentially plaque instability, often the portent of plaque
rupture and severe associated conditions.Recently, coumarin-porphyrin
diads have gained an increasing interest,
displaying a high FRET efficiency between the coumarin donor and the
porphyrin acceptor fluorophores. In 2011, Lin and co-workers reported
a ratiometric coumarin–porphyrin probe for biologically relevant
thiols. For example, cysteine cleaved the disulfide bond linking the
two fluorophores, resulting in a 60-fold increase in the coumarin
emission intensity.[38] In contrast, Liu
and co-workers developed a Zn–coumarin–porphyrin FRET
probe based on 5-(4-hydroxyphenyl)-10,15,20-triphenyl porphyrin (HP-TPP)
and monitored the binding properties to DNA.[39]Here, we report the design, synthesis, photophysical, and
biological
characterization of a “turn-on” coumarin–porphyrin
FRET probe for HO-1, namely Fe–L (Figure ).
Complex Fe–L is based
on the structure of dimethyldeuteroheme (Fe–DMD), a symmetrical
analogue of Fe–PPIX, known to display an activity toward HO-1.[40] The “turn-on” fluorescent probe
was designed to exploit the regioselective α-cleavage of Fe-PPIX
observed during HO-1 catabolism. In this process, the α-carbon
atom linking the coumarin donor and porphyrin acceptor fluorophores
is lost during porphyrin decyclization and the FRET process is switched
off, resulting in an increase in the fluorescence emission intensity
of the coumarin donor fluorophore (Figure A). A 7-hydroxymethylcoumarin moiety was
selected as the donor fluorophore, due to the possibility of functionalization
onto a porphyrin scaffold and the excellent spectral overlap with
the absorbance spectrum of porphyrin-based compounds (Figures S1 and S2). Additionally, 7-hydroxymethylcoumarin
derivatives are also known to be fairly photostable,[41,42] including compound 1 (Figure S3), a characteristic that will importantly maximize the observed increase
in fluorescence following enzymatic probe cleavage.
Figure 2
(A) Rationale behind Fe–L probe design and the
formation of 4-(2-((4-methyl-2-oxo-2H-chromen-7-yl)oxy)ethoxy)benzoic
acid (1)
following porphyrin catabolism. (B) Fe–L was not expected to be a substrate for HO-1.
(A) Rationale behind Fe–L probe design and the
formation of 4-(2-((4-methyl-2-oxo-2H-chromen-7-yl)oxy)ethoxy)benzoic
acid (1)
following porphyrin catabolism. (B) Fe–L was not expected to be a substrate for HO-1.The mechanism of Fe–L α-cleavage is expected to be analogous to that
of α-meso phenylheme—where regioselective
decyclization
occurs at the α-carbon atom to form benzoic acid and biliverdin.[43,44] HO-1 catabolism of α-meso phenylheme occurs
via a slightly different pathway from that of Fe-PPIX (Figure ) and without the loss of CO.[43] The exact mechanism is still not completely
understood, but it is thought to proceed via an isoporphyrin intermediate.[44] In the case of Fe–L, the formation of 4-(2-((4-methyl-2-oxo-2H-chromenn-7-yl)oxy)ethoxy)benzoic acid (1)
is likely to be responsible for the fluorescence “turn-on”
following porphyrin catabolism (Figure A).We herein describe a comparison of enzyme
activity of two porphyrin-coumarin
diads Fe–L and Fe–L toward HO-1 catabolism.
An E. coli lysate system overexpressing human HO-1
(hHO-1) was selected to act as a proof-of-concept model. Complex Fe–L is based on the structure
of HP-TPP, and the subsequent Zn-complex has been previously synthesized
by Liu and co-workers.[39] In our study,
the Fe complex was of greater interest, however, as Zn-porphyrins
such as zinc protoporphyrin (ZnPP) are known to inhibit hHO-1 activity.[45] As the structure of Fe–L differs significantly from biologically
relevant Fe-PPIX, it will provide an additional insight into the structural
requirements to maintain HO-1 activity. It was expected that unlike Fe–L, Fe–L would not act as a substrate for HO-1 and
would be used as a control (Figure B).
Results and Discussion
Design, Synthesis and Characterization
of Fe–L and Fe–L
Over the years, numerous analogues
of protoporphyrin
IX (PPIX) have been synthesized for applications from photosensitizers
in photodynamic therapy (PT)[46] to multiporphyrin
arrays.[47] Functionalization is commonly
achieved at two main positions, first, via one or both of the vinyl
positions through Diels–Alder[48] or
bromination[49] reactions. Another route
of functionalization is through amide coupling methodologies of one
(or both) of the propionic acid residues.[50] Such reactivity has been summarized in an excellent review by Senge
and Sitte.[51] However, it still remains
a major challenge to functionalize the α-meso-position of PPIX selectively, as each of the four inequivalent meso-positions have an almost identical reactivity leading
to a mixture of species that are difficult to separate.[52,53]Instead of selectively functionalizing the α-meso-position of PPIX, we designed a porphyrin probe based
on Fe–DMD, Fe–L (Figure ). Similar
to Fe–PPIX, Fe–DMD is a known substrate for HO-1.[40] Importantly, the increased porphyrin symmetry—achieved
by exchanging two vinyl-substituents with two methyl—allows
a phenol linker between the coumarin and porphyrin FRET pair to be
introduced.The synthetic route toward Fe–L is shown in Scheme . Briefly, the synthesis began with benzyl
3,4-dimethyl-1H-pyrrole-2-carboxylate (2), first reported
by Lash and co-workers in 1994.[54] Condensation
of 2 with 4-hydroxybenzaldehyde
in dichloromethane and trifluoracetic acid formed 3 in
moderate yield following purification by column chromatography. Subsequent
benzyl ester hydrogenation and MacDonald-type condensation[55] with diformyl dipyrromethene 5(56) produced 6. Alkylation of 6 with 7 was achieved in DMF at room temperature
over 5 d with potassium carbonate as the base in a procedure adapted
from Wang and Liu.[39] Complexation of 8 with FeCl2·4H2O in chloroform/methanol
(3:1) and methyl ester hydrolysis under basic conditions gave rise
to the formation of complex Fe–L. Ester hydrolysis after metal complexation was found to be
much more effective. Complexation of the free-acid porphyrin was difficult
to achieve, due in part to its poorer solubility in organic solvents
and purification difficulties via column chromatography. No demetalation
was observed during the ester hydrolysis of Fe–L–DME, with only the
desired product present in the MALDI-MS.
Scheme 1
Synthesis of Fe–L
Complex Fe–L was synthesized
as a control to Fe–L for
the biological characterization assays. The synthesis of Fe–L is based on an alkylation reaction of HP–TPP 9 with coumarin 7 under conditions identical
to those reported for the alkylation of 6 (Scheme S1).HO-1 catabolism of Fe–L is predicted to produce coumarin 1 as a byproduct accompanying
biliverdin and Fe2+. In order to confirm the identity of
the coumarin-based degradation product formed during porphyrin catabolism, 1 was synthesized in a two-step procedure from ethyl 4-hydroxybenzoate
(Scheme S2). Coumarin methyl ester 12 was also synthesized and fully characterized to assist
the mass spectrometry analysis of the E. coli lysates.
Photophysical Studies of Fe–L and Fe–L
The photophysical properties of porphyrin compounds have
been studied in great detail due to their widespread application as
photosensitizers for photodynamic therapy,[57−59] chemical probes,
and organic light-emitting devices (OLEDs).[60] The photophysical properties of the two coumarin–porphyrin
ligands and their subsequent Fe2+ complexes in this study
were recorded in aqueous solutions of PBS buffer at pH 7.4 in order
to mimic physiological conditions (Table ). For comparison, photophysical characterization
was also performed in chloroform and is detailed in the Supporting Information (Table S1). It was found
in both PBS buffer and chloroform that all coumarin–porphyrin
diads display excellent FRET efficiencies, estimated at greater 95%
(Figures S4 and S5, Table , and Table S1). Such a high efficiency supports the literature precedent of an
efficient intramolecular energy transfer between coumarin donor and
porphyrin acceptor fluorophores.[38,39]
Table 1
Photophysical Data for 1, 7, and Coumarin–Porphyrin
Diads Discussed in
This Studya
λabs (nm) (ε [104 M–1 cm–1])
compd/complex
UV
Soret
Q-band
emission
λmax (nm)
E (%)
ϕ514nm(%)
(1)
320 (1.5)
384
e
(7)
320 (1.5)
383
e
L1–DME
320 (1.0)
413 (1.6)
b
387,c 638,
675, 708
95.1
0.5
Fe–L1–DME
320 (2.2)
403 (2.5)
b
387c,d
99.2
e
Fe–L1
321 (2.2)
401 (3.0)
b
383c,d
99.6
e
L2
294 (0.6)
430 (2.7)
527 (0.4), 565 (0.2), 603 (0.2), 661 (0.1)
383,c 660, 727
96.8
2.0
320 (0.7)
Fe–L2
320 (1.2)
417 (1.5)
587 (0.8), 629 (0.7)
383c,d
99.4
e
Concentration = 20 μM in
PBS buffer (pH = 7.4), λex = 320 nm, 298 K. Quantum
yields (ϕ) ± 20% were measured using tetraphenylporphyrin
(TPP) in toluene (ϕ514nm = 0.11) as the standard.[62]
Broad
Q-bands.
Residual coumarin
emission.
No porphyrin emission
was observed.
No quantum
yield was measured.
Concentration = 20 μM in
PBS buffer (pH = 7.4), λex = 320 nm, 298 K. Quantum
yields (ϕ) ± 20% were measured using tetraphenylporphyrin
(TPP) in toluene (ϕ514nm = 0.11) as the standard.[62]Broad
Q-bands.Residual coumarin
emission.No porphyrin emission
was observed.No quantum
yield was measured.The
absorbance spectra of Fe–L and Fe–L in PBS
buffer and chloroform are shown in the Supporting Information (Figures S6 and S7). In PBS buffer, Fe–L displayed a broad Soret band centered at
401 nm and a broad Q-band stretching from 541 to 680 nm assigned to
S0 → S2 and S0 → S1 transitions, respectively. The absorbance at 320 nm was assigned
to the coumarin moiety. Biologically relevant analogues L and Fe–L displayed a significantly broader absorbance spectrum
in aqueous media compared to that in chloroform. Such a phenomenon
is typical of PPIX analogues, due to the increase in π-stacking,
and is strongly dependent on pH and ionic strength.[61] As such, slight fluctuations in the absorbance spectra
were observed for Fe–L with pH. However, very little change in the absorbance or emission
spectra were observed for the expected break-apart product (1) from pH 6–10 (Figure S8).In contrast to L,
analogues
of HP–TPP, L and Fe–L, displayed sharper absorbance
spectra in PBS buffer, and red-shifted Soret bands at 430 and 417
nm, respectively (Figure S6). In both Fe-based
porphyrins, complexation of Fe2+ was confirmed by the change
in the number of Q-bands in the UV–vis spectrum in chloroform–from
four to two. A blue-shift in the Soret band was also observed in aqueous
and organic media. Complex Fe–L–DME, for example, displayed a 10 nm hypsochromic
shift in PBS buffer after Fe2+ complexation (Table ).The excitation spectra
of L and L are shown in Figures S9 and S10 and further validate the presence
of FRET from coumarin to porphyrin fluorophores. Similar to the absorbance
spectra, in PBS buffer L displayed
a broad response, even more so than that of the absorbance spectrum.
It was also noted that a split Soret band was present in chloroform
for both L and L. A peak centered at 320 nm, corresponding
to the coumarin donor moiety, was displayed in each instance.The emission spectra of L and L analogues are displayed
in Figure and Figure S11 in PBS buffer and chloroform, respectively.
Following excitation at λmax of the coumarin moiety
(320 nm), characteristic porphyrin emission spectra was observed in
free base analogues L–DME and L. However, a rather different
emission profile was observed in each case. In PBS buffer, L–DME displayed two main
peaks at 638 and 675 nm with a broad shoulder at 708 nm (Figure A). On the other
hand, L presented a spectrum
with two distinct emission peaks at 660 and 727 nm (Figure B). The difference in spectral
shape is likely to be due to π-stacking in aqueous media and
is not observed in chloroform where both spectra have the same emission
profile. In both PBS buffer and chloroform, L displays a red-shifted emission compared to L–DME due to
the increased conjugation provided by the three additional meso-phenyl substituents.
Figure 3
Emission spectra of (A) L–DME (green), Fe–L–DME (orange), Fe–L (purple)
and (B) L (green), Fe–L (orange). Concentration = 20 μM in
PBS buffer pH = 7.4,
λ= 320 nm, 298 K. Slits 10:10.
Emission spectra of (A) L–DME (green), Fe–L–DME (orange), Fe–L (purple)
and (B) L (green), Fe–L (orange). Concentration = 20 μM in
PBS buffer pH = 7.4,
λ= 320 nm, 298 K. Slits 10:10.Following Fe2+ complexation of the free-base
analogues,
porphyrin emission was completely quenched in PBS buffer and chloroform
(Figure and Figure S11). Such behavior is not surprising,
as Fe2+ is well-known to quench fluorescence through electron
and/or energy transfer processes.[63] Complexation
of Fe2+ also significantly quenches residual coumarin emission.
Therefore, prior to porphyrin catabolism by hHO-1, no porphyrin and
only weak coumarin fluorescence was observed.
Determining the HO-1 Activity
To determine whether
the coumarin–porphyrin diads Fe–L and Fe–L act as substrates for HO-1, we incubated the two probes with an E. coli lysate overexpressing hHO-1. E. coli systems have been shown to support recombinant HO-1 function in
the absence of cytochrome p450 reductase (CPR), with the role of CPR
likely substituted by flavodoxin and flavodoxin reductase.[64] Such systems are an ideal proof-of-concept model
due to a high level of hHO-1 expression and have been used effectively
by Sigala and co-workers to probe His-Heme ligation in HO catalysis.[65] In mammalian systems, biliverdin is subsequently
converted to bilirubin by biliverdin reductase (BVR); however, E. coli BL21 does not express BVR. Therefore, the biliverdin
product formed from Fe-L decyclization
is expected to accumulate.Complexes Fe–L and Fe–L were incubated at 37 °C (310 K) for 16 h with E. coli lysate fractions and 1 mM NADPH, a required substrate
of HO-1 catalyzed heme degradation. Such concentrations of NADPH are
higher than physiological levels but were chosen to ensure maximum
possible reaction conversion for our novel design. In order to quantify
HO-1 activity, a control experiment was carried out where Fe–L and Fe–L were mixed with an equal volume of E. coli lysate without addition of NADPH and without incubation. UV–vis,
fluorescence spectroscopy, and mass spectrometry analysis of the bacterial
lysate systems were used to monitor the HO-1-catalyzed porphyrin degradation
of Fe–L and Fe–L.Probe concentrations of 50 μM
were chosen for the UV–vis
and fluorescence analysis of the lysates. Additionally, the emission
intensity of 1 was found to decrease at concentrations
above 50 μM (Figure S12). However,
it was determined that probe concentrations of 50 μM were too
dilute to obtain accurate MS analysis. Instead, concentrations of
200 μM were used for the mass spectrometry analysis.
UV–vis
Spectroscopy
In order to confirm the
validity of the E. coli lysate system, Fe–PPIX
was incubated with the lysate and NADPH (1 mM). Significant changes
in the UV–vis absorbance spectrum indicative of heme degradation
were observed following 16 h incubation after the addition of NADPH
(Figure A). A hypsochromic
shift of the Soret band from 405 to 388 nm and the appearance of a
broad peak centered at 685 nm demonstrated effectively that heme catabolism
to biliverdin was taking place. Similarly, when Fe–L was incubated with the E. coli lysate expressing hHO-1 and NADPH (Figure B), a partial 17 nm hypsochromic shift of
the Soret band to 384 nm was displayed. The appearance of broad peaks
at ca. 650 and 680 nm was also seen, confirming that Fe–L acts as a substrate for hHO-1. However,
from the UV–vis spectra it is evident that the porphyrin degradation
of Fe–L is not as efficient
as Fe–PPIX, due to a split signal and the presence of the Soret
band of Fe–L at 401 nm.
Figure 4
Normalized
UV–vis spectra of (A) Fe–PPIX, (B) Fe–L, and (C) Fe–L in E. coli lysates with
(green) and without 16 h incubation with NADPH (blue). Biliverdin
is highlighted in pink. Concentration = 50 μM, NADPH = 1 mM,
310 K.
Normalized
UV–vis spectra of (A) Fe–PPIX, (B) Fe–L, and (C) Fe–L in E. coli lysates with
(green) and without 16 h incubation with NADPH (blue). Biliverdin
is highlighted in pink. Concentration = 50 μM, NADPH = 1 mM,
310 K.Absorbance studies of the dimethyl
esters of Fe–PPIX (Fe–PPIX–DME)
and Fe–L (Fe–L–DME) in the E. coli lysate support literature precedent suggesting that
the propionic acid residues are essential to maintain HO-1 activity.[40,66,67] In both cases, very little spectral
change was observed following incubation in the E. coli lysates with NADPH (Figure S13).In contrast to Fe–PPIX and Fe–L, minimal spectral differences were reported
when Fe–L was incubated
with hHO-1 and NADPH (Figure C). No shift in the porphyrin Soret band was observed, and
no additional peak was formed at 680 nm, suggesting that HO-1 has
little-to-no activity toward Fe–L. Due to the modified porphyrin structure, biliverdin (or a
biliverdin analogue) would not form during porphyrin catabolism of Fe–L. However, if any activity
toward HO-1 was displayed, the appearance of a peak in the range of
650–700 nm corresponding to the formation of an open-chain
tetrapyrrole would be expected.
Fluorescence Spectroscopy
The emission spectra of Fe–L and Fe–L in the
hHO-1 E. coli lysate
with and without incubation with NADPH (1 mM) are shown in Figure . In the absence
of NADPH and incubation, very weak coumarin emission centered at 383
nm was observed for both coumarin–porphyrin diads. A broad
peak at 440 nm accompanied the characteristic coumarin emission and
was also present in the emission spectra of the E. coli lysate controls, likely due to NADPH. In the bacterial lysate, the
coumarin emission intensity was lower in Fe–L compared to Fe–L. Such a fluorescence response was also observed in
PBS buffer, where a 3.0-fold decrease in the coumarin emission was
reported for Fe–L vs Fe–L (Figure S14).
Figure 5
(A) Coumarin emission intensity of Fe–L and Fe–L in E. coli lysates with or without
16 h incubation
with 1 mM NADPH. (B) Bar chart showing the average change in fluorescence
intensity. Error bars represent the standard deviations of five independent
experiments. Fe–L control
(pink), Fe–L + NADPH
(blue), Fe–L control
(orange), and Fe–L +
NADPH (green). Concentration = 50 μM, λ = 320 nm, 298 K, slits 5:5.
(A) Coumarin emission intensity of Fe–L and Fe–L in E. coli lysates with or without
16 h incubation
with 1 mM NADPH. (B) Bar chart showing the average change in fluorescence
intensity. Error bars represent the standard deviations of five independent
experiments. Fe–L control
(pink), Fe–L + NADPH
(blue), Fe–L control
(orange), and Fe–L +
NADPH (green). Concentration = 50 μM, λ = 320 nm, 298 K, slits 5:5.Fe-DMD analogue Fe–L displayed a 6-fold increase in fluorescence at
383 nm following incubation with added NADPH versus the control (Figure ). Such a wavelength
maxima is closely aligned to that of the anticipated break-apart product,
coumarin 1 (Figure S15). The
significant 6-fold “turn-on” in the
fluorescence intensity in the coumarin region of the spectrum confirms
that α-cleavage of the porphyrin is taking place, accompanied
by the perturbation of the coumarin–porphyrin FRET mechanism.
A fluorescence increase following incubation with NADPH supports the
UV–vis data in Figure , where the formation of biliverdin was observed. Competitive
activity studies with Zn-PP, a well-known HO-1 inhibitor, further
confirmed that the increase in fluorescence is due to HO-1 catalyzed
porphyrin degradation. Following addition of Zn-PP (50 μM) to
the Fe–L reaction incubated
with hHO-1 expressing E. coli lysate and NADPH, no
increase in fluorescence emission intensity versus the control experiment
was observed (Figure S16).In contrast
to Fe–L, very little
fluorescence enhancement was observed for Fe–L following the addition of NADPH to the E. coli lysates and 16 h incubation. Due to the enhanced
fluorescence quenching of the coumarin moiety observed for Fe–L in the control samples, any substantial
hHO-1 activity would be expected to cause a greater fluorescence enhancement
than that of Fe–L as
the break-apart product is formed.The excitation spectra of Fe–L and Fe–L in the E. coli lysates
are shown in Figure S17. Similar to the emission spectra, an increase in the excitation
intensity was reported for Fe–L following incubation in the presence of excess NADPH. A 7-fold increase at 320 nm was observed. A negligible response
was seen for Fe–L, further
demonstrating that it is not metabolized by HO-1.
Mass Spectrometry
Analysis
In order to further certify
and understand the porphyrin catabolism of Fe–L, mass spectrometry analysis of the E. coli lysates was undertaken (MALDI-MS and LC–MS).
It was also envisaged that these techniques would provide additional
information on the regioselectivity of the α-cleavage and confirm
the chemical structure of the break-apart products.Prior to
MS analysis, reaction samples from the E. coli lysates
were first acidified in H2SO4/methanol (5% v/v
H2SO4) to form their subsequent methyl esters
and extracted into chloroform. Such procedures have been used previously
to good effect to form organic soluble biliverdin dimethyl esters,
enabling the regioselectivity of heme analogues to be studied following
porphyrin catabolism[43,44]From MALDI-MS it was determined
that porphyrin catabolism is regioselective
at the α-position with the release of the coumarin donor fluorophore.
Following incubation of Fe–L in E. coli lysates containing excess NADPH,
there was only evidence for the formation of one biliverdin compound
with a mass of 587 Da (Figure S18). Signals
for both mono- and dimethyl esters of Fe–L are also present, supporting the UV–vis
data (Figure ) in
suggesting that porphyrin catabolism is not 100% efficient. Analysis
of the control assay without incubation with NADPH showed no evidence
of α-cleavage (Figure S19).In contrast to Fe–L,
MALDI-MS of Fe–L reaction
mixture extracts in the absence and presence of NADPH produced identical
MALDI-MS spectra (Figures S20 and S21).
There was no evidence toward formation of any porphyrin degradation
products following incubation with excess NADPH.In order to
confirm the identity of break-apart coumarin byproduct
following HO-1 catabolism, the acidified reaction extracts were analyzed
by liquid chromatography mass spectrometry (LC–MS). Samples
of Fe–L and Fe–L with and without incubation with NADPH
(1 mM) were compared to compound 12, the methyl ester
of the predicted break-apart product 1. The UV detection
was set to 320 nm, the absorbance wavelength maximum for 12 and 1 (Figure ).
Figure 6
LC chromatograms of acidified reaction mixture extracts for (A) Fe–L and (B) Fe–L with synthesized methyl ester analogue 12 (blue) as a comparison. Fe–L + NADPH (red), Fe–L control (green). UV detection
at 320 nm (λmax of 12). Concentration
of Fe–L and Fe–L = 200 μM. (C) (+) m/z of 12 at a retention time of 12.1
min and (D) (+) m/z of Fe–L following addition of NADPH at a retention
time of 12.1 min. During LC–MS, methyl ester hydrolysis of 12 to 1 was observed.
LC chromatograms of acidified reaction mixture extracts for (A) Fe–L and (B) Fe–L with synthesized methyl ester analogue 12 (blue) as a comparison. Fe–L + NADPH (red), Fe–L control (green). UV detection
at 320 nm (λmax of 12). Concentration
of Fe–L and Fe–L = 200 μM. (C) (+) m/z of 12 at a retention time of 12.1
min and (D) (+) m/z of Fe–L following addition of NADPH at a retention
time of 12.1 min. During LC–MS, methyl ester hydrolysis of 12 to 1 was observed.Compound 12 displayed a LC retention time of 12.1
min and a mass of 341 Da, suggesting that methyl ester hydrolysis
was occurring during the analysis (Figure A,C). It was found that incubating Fe–L in the E. coli lysate in the presence of NADPH produced an identical species with
the same LC retention time and mass (Figure A,D). Such a result confirms the formation
of compound 1 following porphyrin catabolism, and its
formation is responsible for the 6-fold increase
in fluorescence at 383 nm. The formation of compound 1 and the presence of 12, was not detected in the LC
trace of the control reaction of Fe–L (minus NADPH), or for the reaction mixture extracts
of Fe–L. Such an observation
supports the UV–vis and fluorescence measurements in Figure and 5 respectively, strongly suggesting that an analogue of Fe–PPIX,
or in this case, Fe–DMD is required in order to maintain hHO-1
activity.
Conclusions
Herein, we report the
design, synthesis, photophysical, and biological
characterization of Fe–L, a coumarin-porphyrin FRET probe for hHO-1. We have shown using
an E. coli lysate overexpressing hHO-1 that following
incubation with excess NADPH a 6-fold “turn-on”
in fluorescence at 383 nm is observed. The increase in fluorescence
is due to porphyrin α-cleavage and the perturbation of FRET
from a coumarin donor to a porphyrin acceptor fluorophore. The identity
of the coumarin break-apart product was confirmed by LC-MS to be compound 1, supporting work by Ortiz de Montellano and co-workers who
detected the formation of benzoic acid following HO-1 oxidation of
α-meso-phenylheme.[43] Moreover, we have demonstrated from MALDI-MS analysis that porphyrin
catabolism of Fe–L is
regiospecific at the α-position.HP-TPP analogue Fe–L was found to not act
as a substrate for hHO-1 from UV–vis,
fluorescence, and mass spectrometry analysis. Therefore, it was used
as a control in the assay experiments. The synthesis and analysis
of Fe–L have provided
an additional insight into the structural tolerance of the hHO-1 active
site. It is likely that the addition of three meso-phenyl substituents provide an
additional steric hindrance in the HO-1 binding pocket reducing its
binding affinity and subsequent activity. It is expected that the
absence of two propionic acid residues in Fe–L is also responsible for the lack of metabolism
by HO-1. These residues are known to have important electrostatic
interactions with positively charged side chains lysine (Lys18) and
arginine (Arg183), anchoring heme analogues in the HO-1 active site.
The importance of the propionic acid residues is further highlighted
from the UV–vis spectra of Fe–PPIX–DME and Fe–L–DME in E. coli lysates where no spectral change was
reported following addition of NADPH and incubation.To the
best of our knowledge, this is the first known chemical
probe capable of detecting HO-1 activity. The work detailed here shows
very encouraging and promising results. Following our proof-of-concept
study in E. coli lysates, we are now investigating
the biological characterization of Fe–L in mammalian cells and human derived macrophages,
with promising data (Figure S22). Moreover,
it is thought that a FRET break-apart probe of this nature could be
used to identify HO-1 overexpression in real-time and as a research
tool to accelerate work on the pathophysiology of HO-1. Critically,
it could be developed into a real-time imaging and detection reagent
that would allow the detection of hemorrhagic pathologies. These include
coronary intraplaque hemorrhage in cardiology, or other internal hemorrhages
in stroke or aneurysm. Since hemorrhage or HO-1 is suspected to play
a role in many pathologies, the scope for development is significant.
We also note that this is one of the first descriptions of the application
of the FRET break-apart principle to a small/medium-sized molecule
metabolite. This principle could, therefore, be extended to other
interesting medium-sized metabolites, such as lipids.The structure
of our probe offers flexibility in design for future
modifications, with the possibility of developing a FRET system containing
a more favorable NIR fluorophore. First, a NIR analogue could be achieved
following coordination of an alternative metal ion, e.g. Mg2+, allowing the porphyrin to act as a fluorescent donor to a NIR acceptor.
Another possible avenue to explore is to incorporate both the donor
and acceptor fluorophores onto the structure of Fe-DMD. We are also
exploring the possibility of experimenting with altering the polypyrrole
structure to red-shifted polypyrroles, such as bacteriochlorins, that
are expected to interact with some of the smaller NIR dyes. To this
end, work is currently ongoing to develop new probes with red-shifted
wavelength maxima, to improve the photophysical properties for live
fluorescence imaging. It is important to note that care must also
be taken to ensure that the chosen fluorophore(s) have a high photostability
prior to undertaking these experiments.The development of such
probes will continue to further advance
the field and could enable a range of cardiovascular and neurodegenerative
disorders to be diagnosed more effectively in the near future.
Authors: Joseph J Boyle; Michael Johns; Jonathan Lo; Alessandra Chiodini; Nicola Ambrose; Paul C Evans; Justin C Mason; Dorian O Haskard Journal: Arterioscler Thromb Vasc Biol Date: 2011-11 Impact factor: 8.311
Authors: Clive Yik-Sham Chung; Jessica M Posimo; Sumin Lee; Tiffany Tsang; Julianne M Davis; Donita C Brady; Christopher J Chang Journal: Proc Natl Acad Sci U S A Date: 2019-08-26 Impact factor: 11.205