Literature DB >> 33837370

Intracellular mRNA transport and localized translation.

Sulagna Das1,2, Maria Vera3, Valentina Gandin4, Robert H Singer5,6,7, Evelina Tutucci8.   

Abstract

Fine-tuning cellular physiology in response to intracellular and environmental cues requires precise temporal and spatial control of gene expression. High-resolution imaging technologies to detect mRNAs and their translation state have revealed that all living organisms localize mRNAs in subcellular compartments and create translation hotspots, enabling cells to tune gene expression locally. Therefore, mRNA localization is a conserved and integral part of gene expression regulation from prokaryotic to eukaryotic cells. In this Review, we discuss the mechanisms of mRNA transport and local mRNA translation across the kingdoms of life and at organellar, subcellular and multicellular resolution. We also discuss the properties of messenger ribonucleoprotein and higher order RNA granules and how they may influence mRNA transport and local protein synthesis. Finally, we summarize the technological developments that allow us to study mRNA localization and local translation through the simultaneous detection of mRNAs and proteins in single cells, mRNA and nascent protein single-molecule imaging, and bulk RNA and protein detection methods.

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Year:  2021        PMID: 33837370      PMCID: PMC9346928          DOI: 10.1038/s41580-021-00356-8

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   113.915


  294 in total

1.  Motor-driven intracellular transport powers bacterial gliding motility.

Authors:  Mingzhai Sun; Morgane Wartel; Eric Cascales; Joshua W Shaevitz; Tâm Mignot
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-11       Impact factor: 11.205

2.  Single-Molecule Imaging Reveals Translation of mRNAs Localized to Stress Granules.

Authors:  Daniel Mateju; Bastian Eichenberger; Franka Voigt; Jan Eglinger; Gregory Roth; Jeffrey A Chao
Journal:  Cell       Date:  2020-12-11       Impact factor: 41.582

Review 3.  Protein targeting to subcellular organelles via MRNA localization.

Authors:  Benjamin L Weis; Enrico Schleiff; William Zerges
Journal:  Biochim Biophys Acta       Date:  2013-02

Review 4.  The translation of translational control by FMRP: therapeutic targets for FXS.

Authors:  Jennifer C Darnell; Eric Klann
Journal:  Nat Neurosci       Date:  2013-04-14       Impact factor: 24.884

5.  Asymmetrical beta-actin mRNA translation in growth cones mediates attractive turning to netrin-1.

Authors:  Kin-Mei Leung; Francisca P G van Horck; Andrew C Lin; Rachel Allison; Nancy Standart; Christine E Holt
Journal:  Nat Neurosci       Date:  2006-09-17       Impact factor: 24.884

6.  Synonymous modification results in high-fidelity gene expression of repetitive protein and nucleotide sequences.

Authors:  Bin Wu; Veronika Miskolci; Hanae Sato; Evelina Tutucci; Charles A Kenworthy; Sara K Donnelly; Young J Yoon; Dianne Cox; Robert H Singer; Louis Hodgson
Journal:  Genes Dev       Date:  2015-04-15       Impact factor: 11.361

7.  Stem-loop RNA labeling can affect nuclear and cytoplasmic mRNA processing.

Authors:  Stephanie Heinrich; Corinne L Sidler; Claus M Azzalin; Karsten Weis
Journal:  RNA       Date:  2016-11-10       Impact factor: 4.942

8.  RNA self-assembly contributes to stress granule formation and defining the stress granule transcriptome.

Authors:  Briana Van Treeck; David S W Protter; Tyler Matheny; Anthony Khong; Christopher D Link; Roy Parker
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-26       Impact factor: 11.205

9.  Sequence-dependent but not sequence-specific piRNA adhesion traps mRNAs to the germ plasm.

Authors:  Anastassios Vourekas; Panagiotis Alexiou; Nicholas Vrettos; Manolis Maragkakis; Zissimos Mourelatos
Journal:  Nature       Date:  2016-03-07       Impact factor: 49.962

10.  mRNA localization is linked to translation regulation in the Caenorhabditis elegans germ lineage.

Authors:  Dylan M Parker; Lindsay P Winkenbach; Sam Boyson; Matthew N Saxton; Camryn Daidone; Zainab A Al-Mazaydeh; Marc T Nishimura; Florian Mueller; Erin Osborne Nishimura
Journal:  Development       Date:  2020-07-08       Impact factor: 6.862

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  20 in total

Review 1.  Regulation of spatially restricted gene expression: linking RNA localization and phase separation.

Authors:  Liam C O'Connell; Kimberly L Mowry
Journal:  Biochem Soc Trans       Date:  2021-12-17       Impact factor: 5.407

2.  Orb-dependent polyadenylation contributes to PLP expression and centrosome scaffold assembly.

Authors:  Junnan Fang; Dorothy A Lerit
Journal:  Development       Date:  2022-06-30       Impact factor: 6.862

3.  Analysis of the Expression and Subcellular Distribution of eEF1A1 and eEF1A2 mRNAs during Neurodevelopment.

Authors:  Zoe Wefers; Celia Alecki; Ryan Huang; Suleima Jacob-Tomas; Maria Vera
Journal:  Cells       Date:  2022-06-09       Impact factor: 7.666

4.  Construction of a Novel Prognostic Model in Lung Adenocarcinoma Based on 7-Methylguanosine-Related Gene Signatures.

Authors:  Fei Lu; Jingyan Gao; Yu Hou; Ke Cao; Yaoxiong Xia; Zhengting Chen; Hui Yu; Li Chang; Wenhui Li
Journal:  Front Oncol       Date:  2022-06-16       Impact factor: 5.738

5.  Determining protein polarization proteome-wide using physical dissection of individual Stentor coeruleus cells.

Authors:  Athena Lin; Paul D Piehowski; Chia-Feng Tsai; Tatyana Makushok; Lian Yi; Ulises Diaz; Connie Yan; Diana Summers; Pranidhi Sood; Richard D Smith; Tao Liu; Wallace F Marshall
Journal:  Curr Biol       Date:  2022-04-20       Impact factor: 10.900

6.  Post-transcriptional control of fungal cell wall synthesis.

Authors:  Rebecca A Hall; Edward W J Wallace
Journal:  Cell Surf       Date:  2022-01-12

Review 7.  Annexins Bridging the Gap: Novel Roles in Membrane Contact Site Formation.

Authors:  Carlos Enrich; Albert Lu; Francesc Tebar; Carles Rentero; Thomas Grewal
Journal:  Front Cell Dev Biol       Date:  2022-01-06

8.  Translation-dependent mRNA localization to Caenorhabditis elegans adherens junctions.

Authors:  Cristina Tocchini; Michèle Rohner; Laurent Guerard; Poulomi Ray; Stephen E Von Stetina; Susan E Mango
Journal:  Development       Date:  2021-12-16       Impact factor: 6.868

9.  Development of a split fluorescent protein-based RNA live-cell imaging system to visualize mRNA distribution in plants.

Authors:  Nien-Chen Huang; Kai-Ren Luo; Tien-Shin Yu
Journal:  Plant Methods       Date:  2022-02-08       Impact factor: 4.993

Review 10.  mRNA Trafficking in the Nervous System: A Key Mechanism of the Involvement of Activity-Regulated Cytoskeleton-Associated Protein (Arc) in Synaptic Plasticity.

Authors:  Michal Fila; Laura Diaz; Joanna Szczepanska; Elzbieta Pawlowska; Janusz Blasiak
Journal:  Neural Plast       Date:  2021-09-23       Impact factor: 3.599

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