Literature DB >> 33829291

Genome sequence of Vibrio fluvialis 362.3 isolated from coral Mussismilia braziliensis reveals genes related to marine environment adaptation.

Livia M R Vidal1, Aline R P Gonçalves1, Tainá M Venas1, Gizele D Garcia1, Diogo A Tschoeke1,2, Fabiano L Thompson1, Cristiane C Thompson3.   

Abstract

Vibrio fluvialis is a halophilic bacterium frequently found in estuarine and coastal waters environments. The strain 362.3 was isolated from Mussismilia braziliensis coral of Abrolhos Bank. In this study, to gain insights into the marine adaptation in V. fluvialis, we sequenced the genome of 362.3 strain, which comprised 4,607,294 bp with a G + C content of 50.2%. In silico analysis showed that V. fluvialis 362.2 encodes genes related to chitin catabolic pathway, iron metabolism, osmotic stress and membrane transport.

Entities:  

Keywords:  Halophilic bacteria; Marine adaptation; Mussismilia braziliensis; Vibrio fluvialis

Year:  2021        PMID: 33829291     DOI: 10.1007/s00203-021-02279-6

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  8 in total

1.  CAP3: A DNA sequence assembly program.

Authors:  X Huang; A Madan
Journal:  Genome Res       Date:  1999-09       Impact factor: 9.043

Review 2.  Functional and structural dynamics of NhaA, a prototype for Na(+) and H(+) antiporters, which are responsible for Na(+) and H(+) homeostasis in cells.

Authors:  Etana Padan
Journal:  Biochim Biophys Acta       Date:  2013-12-19

3.  Taxonomy and description of Vibrio fluvialis sp. nov. (synonym group F vibrios, group EF6).

Authors:  J V Lee; P Shread; A L Furniss; T N Bryant
Journal:  J Appl Bacteriol       Date:  1981-02

4.  Roles of NhaA, NhaB, and NhaD Na+/H+ antiporters in survival of Vibrio cholerae in a saline environment.

Authors:  Katia Herz; Sophie Vimont; Etana Padan; Patrick Berche
Journal:  J Bacteriol       Date:  2003-02       Impact factor: 3.490

5.  Comparative genomics reveals evidence of marine adaptation in Salinispora species.

Authors:  Kevin Penn; Paul R Jensen
Journal:  BMC Genomics       Date:  2012-03-08       Impact factor: 3.969

6.  Vibrio ecology, pathogenesis, and evolution.

Authors:  Daniela Ceccarelli; Rita R Colwell
Journal:  Front Microbiol       Date:  2014-05-28       Impact factor: 5.640

7.  Microbial genomic taxonomy.

Authors:  Cristiane C Thompson; Luciane Chimetto; Robert A Edwards; Jean Swings; Erko Stackebrandt; Fabiano L Thompson
Journal:  BMC Genomics       Date:  2013-12-23       Impact factor: 3.969

Review 8.  Vibrio fluvialis: an emerging human pathogen.

Authors:  Thandavarayan Ramamurthy; Goutam Chowdhury; Gururaja P Pazhani; Sumio Shinoda
Journal:  Front Microbiol       Date:  2014-03-07       Impact factor: 5.640

  8 in total

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