Literature DB >> 33825682

The metal cofactor zinc and interacting membranes modulate SOD1 conformation-aggregation landscape in an in vitro ALS model.

Achinta Sannigrahi1, Sourav Chowdhury2, Bidisha Das1,3, Amrita Banerjee4, Animesh Halder5, Amaresh Kumar6, Mohammed Saleem6, Athi N Naganathan7, Sanat Karmakar5, Krishnananda Chattopadhyay1,3.   

Abstract

Aggregation of Cu-Zn superoxide dismutase (SOD1) is implicated in the motor neuron disease, amyotrophic lateral sclerosis (ALS). Although more than 140 disease mutations of SOD1 are available, their stability or aggregation behaviors in membrane environment are not correlated with disease pathophysiology. Here, we use multiple mutational variants of SOD1 to show that the absence of Zn, and not Cu, significantly impacts membrane attachment of SOD1 through two loop regions facilitating aggregation driven by lipid-induced conformational changes. These loop regions influence both the primary (through Cu intake) and the gain of function (through aggregation) of SOD1 presumably through a shared conformational landscape. Combining experimental and theoretical frameworks using representative ALS disease mutants, we develop a 'co-factor derived membrane association model' wherein mutational stress closer to the Zn (but not to the Cu) pocket is responsible for membrane association-mediated toxic aggregation and survival time scale after ALS diagnosis.
© 2021, Sannigrahi et al.

Entities:  

Keywords:  ALS; aggregation; cofactor; human; membrane; molecular biophysics; neuro-degeneration; structural biology

Year:  2021        PMID: 33825682      PMCID: PMC8087447          DOI: 10.7554/eLife.61453

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  72 in total

1.  Measurement of microsecond dynamic motion in the intestinal fatty acid binding protein by using fluorescence correlation spectroscopy.

Authors:  Krishnananda Chattopadhyay; Saveez Saffarian; Elliot L Elson; Carl Frieden
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-15       Impact factor: 11.205

Review 2.  Fourier transform infrared spectroscopic analysis of protein secondary structures.

Authors:  Jilie Kong; Shaoning Yu
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2007-08       Impact factor: 3.848

3.  Protection by dietary zinc in ALS mutant G93A SOD transgenic mice.

Authors:  Irina P Ermilova; Vladimir B Ermilov; Mark Levy; Emily Ho; Cliff Pereira; Joseph S Beckman
Journal:  Neurosci Lett       Date:  2005-01-13       Impact factor: 3.046

4.  The Cost of Long Catalytic Loops in Folding and Stability of the ALS-Associated Protein SOD1.

Authors:  Fan Yang; Huabing Wang; Derek T Logan; Xin Mu; Jens Danielsson; Mikael Oliveberg
Journal:  J Am Chem Soc       Date:  2018-11-27       Impact factor: 15.419

5.  An intersubunit disulfide bond prevents in vitro aggregation of a superoxide dismutase-1 mutant linked to familial amytrophic lateral sclerosis.

Authors:  Soumya S Ray; Richard J Nowak; Konstantin Strokovich; Robert H Brown; Thomas Walz; Peter T Lansbury
Journal:  Biochemistry       Date:  2004-05-04       Impact factor: 3.162

6.  Amyotrophic lateral sclerosis-associated SOD1 mutant proteins bind and aggregate with Bcl-2 in spinal cord mitochondria.

Authors:  Piera Pasinelli; Mary Elizabeth Belford; Niall Lennon; Brian J Bacskai; Bradley T Hyman; Davide Trotti; Robert H Brown
Journal:  Neuron       Date:  2004-07-08       Impact factor: 17.173

7.  Disulfide bond mediates aggregation, toxicity, and ubiquitylation of familial amyotrophic lateral sclerosis-linked mutant SOD1.

Authors:  Jun-ichi Niwa; Shin-ichi Yamada; Shinsuke Ishigaki; Jun Sone; Miho Takahashi; Masahisa Katsuno; Fumiaki Tanaka; Manabu Doyu; Gen Sobue
Journal:  J Biol Chem       Date:  2007-07-31       Impact factor: 5.157

8.  Proteomic characterization of lipid raft proteins in amyotrophic lateral sclerosis mouse spinal cord.

Authors:  Jianjun Zhai; Anna-Lena Ström; Renee Kilty; Priya Venkatakrishnan; James White; William V Everson; Eric J Smart; Haining Zhu
Journal:  FEBS J       Date:  2009-05-05       Impact factor: 5.542

Review 9.  Mitochondrial membrane biogenesis: phospholipids and proteins go hand in hand.

Authors:  Vishal M Gohil; Miriam L Greenberg
Journal:  J Cell Biol       Date:  2009-02-23       Impact factor: 10.539

10.  Synaptic Actions of Amyotrophic Lateral Sclerosis-Associated G85R-SOD1 in the Squid Giant Synapse.

Authors:  Yuyu Song
Journal:  eNeuro       Date:  2020-04-22
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  3 in total

1.  SOD1 mutations associated with amyotrophic lateral sclerosis analysis of variant severity.

Authors:  Mariusz Berdyński; Przemysław Miszta; Krzysztof Safranow; Peter M Andersen; Mitsuya Morita; Sławomir Filipek; Cezary Żekanowski; Magdalena Kuźma-Kozakiewicz
Journal:  Sci Rep       Date:  2022-01-07       Impact factor: 4.379

2.  Synthesis and Discovery of Schiff Base Bearing Furopyrimidinone for Selective Recognition of Zn2+ and its Applications in Cell Imaging and Detection of Cu2.

Authors:  Yanggen Hu; Chao Luo; Lili Gui; Jing Lu; Juncai Fu; Xinya Han; Junkai Ma; Lun Luo
Journal:  Front Chem       Date:  2021-11-29       Impact factor: 5.221

Review 3.  The Wako-Saitô-Muñoz-Eaton Model for Predicting Protein Folding and Dynamics.

Authors:  Koji Ooka; Runjing Liu; Munehito Arai
Journal:  Molecules       Date:  2022-07-12       Impact factor: 4.927

  3 in total

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