| Literature DB >> 33825325 |
Hye Jin Kim1,2, Soo Hyun Nam2, Hye Mi Kwon2, Si On Lim3, Jae Hong Park2, Hyun Su Kim4, Sang Beom Kim5, Kyung Suk Lee6, Ji Eun Lee1,7, Byung-Ok Choi1,2,7, Ki Wha Chung3.
Abstract
BACKGROUND: Charcot-Marie-Tooth disease (CMT) is the most common disorder of inherited peripheral neuropathies characterized by distal muscle weakness and sensory loss. CMT is usually classified into three types, demyelinating, axonal, and intermediate neuropathies. Mutations in myelin protein zero (MPZ) gene which encodes a transmembrane protein of the Schwann cells as a major component of peripheral myelin have been reported to cause various type of CMT.Entities:
Keywords: zzm321990MPZzzm321990; Charcot-Marie-Tooth disease; Korea; phenotypic heterogeneity
Mesh:
Substances:
Year: 2021 PMID: 33825325 PMCID: PMC8222852 DOI: 10.1002/mgg3.1678
Source DB: PubMed Journal: Mol Genet Genomic Med ISSN: 2324-9269 Impact factor: 2.183
MPZ mutations in the Korean CMT patients
| Nucleotide changes | Amino acid changes | No. of families (Family ID) | CMT type | References |
|---|---|---|---|---|
| c.149G>A | p.C50Y | 1 (FC619) | CMT1B | Milovidova et al. ( |
| c.154T>G | p.F52V | 2 (FC156, FC157) | CMT1B, CMT2I | Nam et al. ( |
| c.155T>G | p.F52C | 1 (FC611) | CMT1B | This study |
| c.233C>T | p.S78L | 3 (FC202, FC626, FC1200) | CMT1B | Nelis et al. ( |
| c.242A>G | p.H81R | 1 (FC1159) | CMT1B | Sorour et al. ( |
| c.243C>G | p.H81Q | 2 (FC133, FC1072) | CMT1B | Choi et al. ( |
| c.262T>C | p.Y88H | 1 (FC141) | CMT2I | Nam et al. ( |
| c.292C>T | p.R98C | 3 (FC263, FC508, FC533) | CMT1B | Rouger et al. ( |
| c.293G>T | p.R98L | 1 (FC987) | CMT1B | Wang et al. ( |
| c.298C>T | p.Q100X | 2 (FC486, FC930) | CMT2I | Miltenberger‐Miltenyi et al. ( |
| c.358_360del | p.S120del | 1 (FC304) | CMT1B | This study |
| c.371C>T | p.T124M | 1 (FC658) | CMT2I | Schiavon et al. ( |
| c.380G>C | p.C127S | 1 (FC560) | CMT1B | Farwell et al. ( |
| c.394C>G | p.P132A | 1 (FC452) | CMT1B | Xu et al. ( |
| c.394C>T | p.P132S | 2 (FC203, FC572) | CMT1B | This study |
| c.398C>T | p.P133L | 1 (FC201) | CMT1B | This study |
| c.410G>A | p.G137D | 1 (FC240) | CMT1B | Østern et al. ( |
| c.449‐1G>T | Splicing acceptor site | 5 (FC019, FC164, FC509, FC797, FC943) | CMT1B, CMTDID | Choi et al. ( |
| c.522_525del | p.L175fs*74 | 1 (FC455) | CMT1B | Warner et al. ( |
| c.659A>G | p.Y220C | 2 (FC336, FC596) | CMT1B | This study |
| c.706A>G | p.K236E | 2 (FC015, FC559) | CMT2I | Choi et al. ( |
| c.745T>G | p.X249E*64 | 1 (FC1027) | CMT1B | DiVincenzo et al. ( |
Abbreviation: CMT, Charcot‐Marie‐Tooth disease.
Five novel MPZ mutations found in this study
| Mutation | No. of families | Type | dbSNP accession No | Mutant allele frequencies | In silico analysis | ACMG | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleotide | Amino acid | 1000G | gnomAD | EVS | KRGDB | PROVEAN | Polyphen‐2 | MUpro | Fahmm | ||||
| c.155T>G | p.F52C | 1 | CMT1B | – | – | – | – | – | −7.532 | 1.000 | −0.916 | −3.54 | LP |
| c.358_360del | p.S120del | 1 | CMT1B | – | – | – | – | – | −9.492 | – | – | – | LP |
| c.394C>T | p.P132S | 2 | CMT1B | rs1553259649 | – | – | – | – | −6.841 | 0.988 | −0.998 | 0.00 | LP |
| c.398C>T | p.P133L | 1 | CMT1B | rs1558154010 | – | – | – | – | −9.044 | 0.997 | −0.878 | −3.30 | LP |
| c.659A>G | p.Y220C | 2 | CMT1B | rs767339597 | – | 4.0E‐06 | – | – | −3.141 | 0.999 | 0.552 | −3.14 | LP |
Abbreviations: 1000G, 1000 Genomes database; ACMG, American College of Medical Genetics and Genomics guideline; CMT1B, Charcot‐Marie‐Tooth disease type 1B; EVS, Exome Variant Server; gnomAD, Genome Aggregation Database; KRGDB, Korean Reference Genome Database; LP, likely pathogenic.
Pathogenic prediction.
FIGURE 1Novel MPZ mutations in the CMT families. (a) The pedigrees and genotypes of 6 CMT families with novel MPZ mutations (□, ○: unaffected members; ■, ●: affected members). (b) Schematic structure of the MPZ protein and location of the identified mutations in this study. Mutations indicated by red color are unreported mutations. (c) Sequencing chromatograms of the novel MPZ mutations. Vertical arrows indicate the mutation sites (Mut: mutant allele, WT: wild‐type allele). (d) Conservation analysis of the amino acid sequences on the mutation sites (Human: NP_000521.2, mouse: NP_001302428.1, cattle: NP_001072975.1, chicken: NP_001345858.1, frog: NP_001072741.1, and zebrafish: XP_017213076.1)
FIGURE 23D structure of the extra‐cellular domain of the MPZ protein and the sites of the novel mutations. (a) The crystal structure of the extra‐cellular domain is depicted in green. The location of four of the five novel mutations, F52, S120, P132, and P133 are colored in pink, while the intra‐molecular disulfide bond between C50 and C127 is shown in yellow. (b‐e) A zoom‐in view of the mutated residues and their surroundings. (b) The benzene ring of F52 (pink) is located in between two β strands. (c) The S120 (pink) is located in a helix forming hydrogen bonds (dashed) to the surroundings. (d, e) The P132 and P133 residues (pink) are located in a proline‐hinge connecting two β strands. These 3D structures were visualized using the Mol* feature of Protein Data Bank (http://www.rcsb.org)
Frequencies of CMT patients with MPZ mutations in various populations based on a literature review
| Populations | Frequencies | References | |
|---|---|---|---|
| Total CMT patients (%) | CMT patients excluding CMT1A (%) | ||
| Korean | 3.2 | 4.7 | This study |
| Chinese | 3.3 | 6.4 | Hsu et al. ( |
| Japanese | 5.1 | NA | Yoshimura et al. ( |
| German | 4.2 | 6.4 | Gess et al. ( |
| British | 3.1 | 5.1 | Murphy et al. ( |
| American | 4.1 | 6.5 | Fridman et al. ( |
| Spanish | 4.3 | 7.5 | Sivera et al. ( |
| Italian | 4.3 | 12.3 | Manganelli et al. ( |
| Hungarian | 4.5 | 7.5 | Milley et al. ( |
| Norwegian | 6.0 | NA | Østern et al. ( |
| Russian | 3.5 | 5.2 | Mersiyanova et al. ( |
| Finnish | 5.2 | NA | Silander et al. ( |
| Austrian | 4.0 | NA | Miltenberger‐Miltenyi et al. ( |
Abbreviations: CMT, Charcot‐Marie‐Tooth disease 1A; NA, not available.
Clinical and electrophysiological features in CMT patients with MPZ mutations
| Items | CMT1B | CMTDID | CMT2I |
| |||
|---|---|---|---|---|---|---|---|
| 1B vs. DID | 1B vs. 2I | DID vs. 2I | ANOVA | ||||
| Patient number | 48 | 5 | 7 | ||||
| Female ratio | 54% | 20% | 14% | 0.490 | 0.263 | 0.793 | . |
| Examined age (years) | 21.0 (13.0–40.0) | 33.0 (25.0–50.0) | 51.0 (44.0–57.0) | 0.129 | 0.002 | 0.332 | 0.005 |
| Onset age (years) | 5.0 (2.0–12.0) | 15.0 (15.0–20.0) | 36.0 (29.5–51.0) | 0.025 | >0.001 | 0.053 | >0.001 |
| Disability score | |||||||
| CMTNS | 15.0 (13.0–22.0) | 9.5 (9.0–10.3) | 7.0 (6.0–9.0) | 0.102 | 0.004 | 0.326 | 0.023 |
| FDS | 2.5 (2.0–3.0) | 2.0 (2.0–2.0) | 1.0 (1.0–1.5) | 0.092 | 0.022 | 0.092 | 0.004 |
| Nerve conduction studies | |||||||
| Patient number | 38 | 4 | 5 | ||||
| Median motor nerve | |||||||
| CMAP (mV) | 6.0 ± 5.6 | 12.8 ± 1.9 | 13.0 ± 4.3 | 0.033 | 0.011 | 0.915 | 0.006 |
| MNCV (m/s) | 12.2 ± 11.0 | 41.3 ± 3.1 | 46.0 ± 6.6 | >0.001 | >0.001 | 0.431 | >0.001 |
| Peroneal nerve | |||||||
| CMAP (mV) | 0.9 ± 2.0 | 4.0 ± 3.1 | 2.1 ± 2.8 | 0.001 | 0.231 | 0.132 | 0.002 |
| MNCV (m/s) | 5.1 ± 9.0 | 25.7 ± 17.2 | 20.4 ± 19.4 | >0.001 | 0.004 | 0.278 | >0.001 |
| Median sensory nerve | |||||||
| SNAP (μV) | 2.3 ± 4.7 | 10.8 ± 15.3 | 15.6 ± 12.5 | >0.001 | >0.001 | 0.718 | >0.001 |
| SNCV (m/s) | 7.4 ± 11.7 | 18.0 ± 25.5 | 34.4 ± 4.3 | 0.021 | >0.001 | 0.780 | >0.001 |
| Sural nerve | |||||||
| SNAP (μV) | 1.1 ± 3.5 | 6.9 ± 9.7 | 5.4 ± 5.9 | 0.001 | 0.059 | 0.346 | 0.002 |
| SNCV (m/s) | 3.4 ± 9.0 | 13.3 ± 18.7 | 17.2 ± 14.9 | 0.016 | 0.020 | 0.643 | 0.007 |
Normal NCV values: motor median nerve ≥50.5 m/s; sensory median nerve ≥39.3 m/s; sural nerve ≥32.1 m/s. Normal amplitude values: motor median nerve ≥6 mV; sensory median nerve ≥8.8 μV; sural nerve ≥6.0 μV.
Abbreviations: ANOVA, analysis of variance; FDS, functional disability scale; CMTNS, Charcot‐Marie‐Tooth neuropathy score; CMAP, compound muscle action potential; CMT, Charcot‐Marie‐Tooth disease; MNCV, motor nerve conduction velocity; SNAP, sensory nerve action potential; SNCV, sensory nerve conduction velocity.
FIGURE 3Scatter plot diagrams with Pearson's correlation analysis between the onset ages and clinical phenotypes. (a) Onset vs. CMT neuropathy score (CMTNS), (b) Onset vs. functional disability scale (FDS). (c) Onset vs. median motor nerve conduction velocity (MNCV), (d) Onset vs. median motor nerve compound muscle action potential (CMAP), (e) Onset vs. sural sensory nerve conduction velocity (SNCV), and (f) Onset vs. sural sensory nerve action potential (SNAP)
FIGURE 4Axial T1‐weighted MRIs of the thigh (up) and calf (down) leg in the CMT1B, CMTDID, and CMT2I patients. (a) A 56‐year‐old female CMT1B patient (FC1159: p.H81R) showing total fat replacement of the anterior and lateral compartment muscles in the distal lower leg and severe (grades 3 and 4) fat infiltration in anterior and posterior compartment muscles in the distal thigh. (b) A 77‐year‐old male CMTDID patient (FC943: c.449‐1G>T) showing severe (grades 3 and 4) fat infiltration in nearly all compartment muscles of the distal lower leg and mild fat infiltration in the distal thigh muscles. (CF) A 53‐year‐old male CMT2I patient (FC658: p.T124M) showing severe fat infiltration in the anterior, superficial, and deep posterior compartment muscles of the distal lower leg and mild fat infiltration in the thigh muscles