Literature DB >> 3382401

Beta-thalassemia due to a T----A mutation within the ATA box.

Y J Fei1, T A Stoming, G D Efremov, D G Efremov, R Battacharia, J M Gonzalez-Redondo, C Altay, A Gurgey, T H Huisman.   

Abstract

Sequence analyses of amplified DNA from a Yugoslavian patient with Hb Lepore-beta-thalassemia and from his father with a simple beta-thalassemia trait have revealed a T----A mutation within the ATA box at a position 30 base pairs upstream from the Cap site. The nucleotide substitution was confirmed through dot-blot analysis of amplified DNA with specific 32P-labeled synthetic oligonucleotide probes. The patient had a clinically severe condition; his Hb Lepore-beta-thalassemia was of the beta + type, as about 8-10% of the non-alpha chain was normal beta A. The same T----A mutation at nucleotide -30 was present on both chromosomes of a young Turkish patient who suffered from a thalassemia intermedia with a low level of Hb F (13.1%) and a relatively high beta A chain synthesis. These data are similar to those obtained for other types of beta +-thalassemia caused by comparable substitutions at positions 31, 29, and 28 base pairs upstream from the Cap site of the beta-globin gene.

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Year:  1988        PMID: 3382401     DOI: 10.1016/s0006-291x(88)81157-4

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  5 in total

1.  Regulatory single nucleotide polymorphisms at the beginning of intron 2 of the human KRAS gene.

Authors:  Elena V Antontseva; Marina Yu Matveeva; Natalia P Bondar; Elena V Kashina; Elena Yu Leberfarb; Leonid O Bryzgalov; Polina A Gervas; Anastasia A Ponomareva; Nadezhda V Cherdyntseva; Yury L Orlov; Tatiana I Merkulova
Journal:  J Biosci       Date:  2015-12       Impact factor: 1.826

2.  A novel -32 (C-A) mutant identified in amplified genomic DNA of a Chinese beta-thalassemic patient.

Authors:  L I Lin; K S Lin; K H Lin; T Y Cheng
Journal:  Am J Hum Genet       Date:  1992-01       Impact factor: 11.025

3.  An experimental verification of the predicted effects of promoter TATA-box polymorphisms associated with human diseases on interactions between the TATA boxes and TATA-binding protein.

Authors:  Ludmila Savinkova; Irina Drachkova; Tatyana Arshinova; Petr Ponomarenko; Mikhail Ponomarenko; Nikolay Kolchanov
Journal:  PLoS One       Date:  2013-02-12       Impact factor: 3.240

4.  Detection of regulatory SNPs in human genome using ChIP-seq ENCODE data.

Authors:  Leonid O Bryzgalov; Elena V Antontseva; Marina Yu Matveeva; Alexander G Shilov; Elena V Kashina; Viatcheslav A Mordvinov; Tatyana I Merkulova
Journal:  PLoS One       Date:  2013-10-29       Impact factor: 3.240

5.  How to Use SNP_TATA_Comparator to Find a Significant Change in Gene Expression Caused by the Regulatory SNP of This Gene's Promoter via a Change in Affinity of the TATA-Binding Protein for This Promoter.

Authors:  Mikhail Ponomarenko; Dmitry Rasskazov; Olga Arkova; Petr Ponomarenko; Valentin Suslov; Ludmila Savinkova; Nikolay Kolchanov
Journal:  Biomed Res Int       Date:  2015-10-04       Impact factor: 3.411

  5 in total

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