Literature DB >> 33823397

Anatomy-guided multimodal registration by learning segmentation without ground truth: Application to intraprocedural CBCT/MR liver segmentation and registration.

Bo Zhou1, Zachary Augenfeld2, Julius Chapiro3, S Kevin Zhou4, Chi Liu5, James S Duncan6.   

Abstract

Multimodal image registration has many applications in diagnostic medical imaging and image-guided interventions, such as Transcatheter Arterial Chemoembolization (TACE) of liver cancer guided by intraprocedural CBCT and pre-operative MR. The ability to register peri-procedurally acquired diagnostic images into the intraprocedural environment can potentially improve the intra-procedural tumor targeting, which will significantly improve therapeutic outcomes. However, the intra-procedural CBCT often suffers from suboptimal image quality due to lack of signal calibration for Hounsfield unit, limited FOV, and motion/metal artifacts. These non-ideal conditions make standard intensity-based multimodal registration methods infeasible to generate correct transformation across modalities. While registration based on anatomic structures, such as segmentation or landmarks, provides an efficient alternative, such anatomic structure information is not always available. One can train a deep learning-based anatomy extractor, but it requires large-scale manual annotations on specific modalities, which are often extremely time-consuming to obtain and require expert radiological readers. To tackle these issues, we leverage annotated datasets already existing in a source modality and propose an anatomy-preserving domain adaptation to segmentation network (APA2Seg-Net) for learning segmentation without target modality ground truth. The segmenters are then integrated into our anatomy-guided multimodal registration based on the robust point matching machine. Our experimental results on in-house TACE patient data demonstrated that our APA2Seg-Net can generate robust CBCT and MR liver segmentation, and the anatomy-guided registration framework with these segmenters can provide high-quality multimodal registrations.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cone-beam computed tomography; Image-guided intervention; Multimodal registration; Unsupervised segmentation

Mesh:

Year:  2021        PMID: 33823397      PMCID: PMC8184611          DOI: 10.1016/j.media.2021.102041

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   13.828


  22 in total

1.  Landmark-based elastic registration using approximating thin-plate splines.

Authors:  K Rohr; H S Stiehl; R Sprengel; T M Buzug; J Weese; M H Kuhn
Journal:  IEEE Trans Med Imaging       Date:  2001-06       Impact factor: 10.048

2.  Multimodality image registration by maximization of mutual information.

Authors:  F Maes; A Collignon; D Vandermeulen; G Marchal; P Suetens
Journal:  IEEE Trans Med Imaging       Date:  1997-04       Impact factor: 10.048

3.  VoxelMorph: A Learning Framework for Deformable Medical Image Registration.

Authors:  Guha Balakrishnan; Amy Zhao; Mert R Sabuncu; John Guttag; Adrian V Dalca
Journal:  IEEE Trans Med Imaging       Date:  2019-02-04       Impact factor: 10.048

4.  CHAOS Challenge - combined (CT-MR) healthy abdominal organ segmentation.

Authors:  A Emre Kavur; N Sinem Gezer; Mustafa Barış; Sinem Aslan; Pierre-Henri Conze; Vladimir Groza; Duc Duy Pham; Soumick Chatterjee; Philipp Ernst; Savaş Özkan; Bora Baydar; Dmitry Lachinov; Shuo Han; Josef Pauli; Fabian Isensee; Matthias Perkonigg; Rachana Sathish; Ronnie Rajan; Debdoot Sheet; Gurbandurdy Dovletov; Oliver Speck; Andreas Nürnberger; Klaus H Maier-Hein; Gözde Bozdağı Akar; Gözde Ünal; Oğuz Dicle; M Alper Selver
Journal:  Med Image Anal       Date:  2020-12-25       Impact factor: 8.545

5.  Usefulness of MRI-CBCT image registration in the evaluation of temporomandibular joint internal derangement by novice examiners.

Authors:  Mohammed A Q Al-Saleh; Noura Alsufyani; Hollis Lai; Manuel Lagravere; Jacob L Jaremko; Paul W Major
Journal:  Oral Surg Oral Med Oral Pathol Oral Radiol       Date:  2016-11-02

Review 6.  How I do it: Cone-beam CT during transarterial chemoembolization for liver cancer.

Authors:  Vania Tacher; Alessandro Radaelli; MingDe Lin; Jean-François Geschwind
Journal:  Radiology       Date:  2015-02       Impact factor: 11.105

7.  Unsupervised MR-to-CT Synthesis Using Structure-Constrained CycleGAN.

Authors:  Heran Yang; Jian Sun; Aaron Carass; Can Zhao; Junghoon Lee; Jerry L Prince; Zongben Xu
Journal:  IEEE Trans Med Imaging       Date:  2020-11-30       Impact factor: 10.048

8.  Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.

Authors:  Freddie Bray; Jacques Ferlay; Isabelle Soerjomataram; Rebecca L Siegel; Lindsey A Torre; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2018-09-12       Impact factor: 508.702

9.  MR to ultrasound registration for image-guided prostate interventions.

Authors:  Yipeng Hu; Hashim Uddin Ahmed; Zeike Taylor; Clare Allen; Mark Emberton; David Hawkes; Dean Barratt
Journal:  Med Image Anal       Date:  2010-12-13       Impact factor: 8.545

10.  A Novel CT to Cone-Beam CT Registration Method Enables Immediate Real-Time Intraprocedural Three-Dimensional Assessment of Ablative Treatments of Liver Malignancies.

Authors:  Marco Solbiati; Katia M Passera; S Nahum Goldberg; Alessandro Rotilio; Tiziana Ierace; Vittorio Pedicini; Dario Poretti; Luigi Solbiati
Journal:  Cardiovasc Intervent Radiol       Date:  2018-02-28       Impact factor: 2.740

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  4 in total

1.  Co-optimization Learning Network for MRI Segmentation of Ischemic Penumbra Tissues.

Authors:  Liangliang Liu; Jing Zhang; Jin-Xiang Wang; Shufeng Xiong; Hui Zhang
Journal:  Front Neuroinform       Date:  2021-12-16       Impact factor: 4.081

2.  DuDoDR-Net: Dual-domain data consistent recurrent network for simultaneous sparse view and metal artifact reduction in computed tomography.

Authors:  Bo Zhou; Xiongchao Chen; S Kevin Zhou; James S Duncan; Chi Liu
Journal:  Med Image Anal       Date:  2021-10-29       Impact factor: 8.545

3.  Harmonized neonatal brain MR image segmentation model for cross-site datasets.

Authors:  Jian Chen; Yue Sun; Zhenghan Fang; Weili Lin; Gang Li; Li Wang
Journal:  Biomed Signal Process Control       Date:  2021-06-01       Impact factor: 5.076

Review 4.  Artificial intelligence in liver diseases: Improving diagnostics, prognostics and response prediction.

Authors:  David Nam; Julius Chapiro; Valerie Paradis; Tobias Paul Seraphin; Jakob Nikolas Kather
Journal:  JHEP Rep       Date:  2022-02-02
  4 in total

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