Literature DB >> 33816998

Cervical cancer detection in pap smear whole slide images using convNet with transfer learning and progressive resizing.

Anant R Bhatt1, Amit Ganatra2, Ketan Kotecha3.   

Abstract

Cervical intraepithelial neoplasia (CIN) and cervical cancer are major health problems faced by women worldwide. The conventional Papanicolaou (Pap) smear analysis is an effective method to diagnose cervical pre-malignant and malignant conditions by analyzing swab images. Various computer vision techniques can be explored to identify potential precancerous and cancerous lesions by analyzing the Pap smear image. The majority of existing work cover binary classification approaches using various classifiers and Convolution Neural Networks. However, they suffer from inherent challenges for minute feature extraction and precise classification. We propose a novel methodology to carry out the multiclass classification of cervical cells from Whole Slide Images (WSI) with optimum feature extraction. The actualization of Conv Net with Transfer Learning technique substantiates meaningful Metamorphic Diagnosis of neoplastic and pre-neoplastic lesions. As the Progressive Resizing technique (an advanced method for training ConvNet) incorporates prior knowledge of the feature hierarchy and can reuse old computations while learning new ones, the model can carry forward the extracted morphological cell features to subsequent Neural Network layers iteratively for elusive learning. The Progressive Resizing technique superimposition in consultation with the Transfer Learning technique while training the Conv Net models has shown a substantial performance increase. The proposed binary and multiclass classification methodology succored in achieving benchmark scores on the Herlev Dataset. We achieved singular multiclass classification scores for WSI images of the SIPaKMed dataset, that is, accuracy (99.70%), precision (99.70%), recall (99.72%), F-Beta (99.63%), and Kappa scores (99.31%), which supersede the scores obtained through principal methodologies. GradCam based feature interpretation extends enhanced assimilation of the generated results, highlighting the pre-malignant and malignant lesions by visual localization in the images.
© 2021 Bhatt et al.

Entities:  

Keywords:  Cervical cancer; Cervical cytology; Convolution neural network; Deep learning; Herlev; Metamorphic analysis; Papanicolaou smear; Progressive resizing; Sipakmed; Transfer learning

Year:  2021        PMID: 33816998      PMCID: PMC7959623          DOI: 10.7717/peerj-cs.348

Source DB:  PubMed          Journal:  PeerJ Comput Sci        ISSN: 2376-5992


  5 in total

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Authors:  Debbie Saslow; Diane Solomon; Herschel W Lawson; Maureen Killackey; Shalini L Kulasingam; Joanna Cain; Francisco A R Garcia; Ann T Moriarty; Alan G Waxman; David C Wilbur; Nicolas Wentzensen; Levi S Downs; Mark Spitzer; Anna-Barbara Moscicki; Eduardo L Franco; Mark H Stoler; Mark Schiffman; Philip E Castle; Evan R Myers
Journal:  Am J Clin Pathol       Date:  2012-04       Impact factor: 2.493

2.  Automated detection of cell nuclei in pap smear images using morphological reconstruction and clustering.

Authors:  Marina E Plissiti; Christophoros Nikou; Antonia Charchanti
Journal:  IEEE Trans Inf Technol Biomed       Date:  2010-10-14

3.  Weighted kappa: nominal scale agreement with provision for scaled disagreement or partial credit.

Authors:  J Cohen
Journal:  Psychol Bull       Date:  1968-10       Impact factor: 17.737

4.  DeepPap: Deep Convolutional Networks for Cervical Cell Classification.

Authors:  Ling Zhang; Isabella Nogues; Ronald M Summers; Shaoxiong Liu; Jianhua Yao
Journal:  IEEE J Biomed Health Inform       Date:  2017-05-19       Impact factor: 5.772

Review 5.  The 2001 Bethesda System: terminology for reporting results of cervical cytology.

Authors:  Diane Solomon; Diane Davey; Robert Kurman; Ann Moriarty; Dennis O'Connor; Marianne Prey; Stephen Raab; Mark Sherman; David Wilbur; Thomas Wright; Nancy Young
Journal:  JAMA       Date:  2002-04-24       Impact factor: 56.272

  5 in total
  5 in total

1.  COVID-19 pulmonary consolidations detection in chest X-ray using progressive resizing and transfer learning techniques.

Authors:  Anant Bhatt; Amit Ganatra; Ketan Kotecha
Journal:  Heliyon       Date:  2021-06-05

2.  Kinship verification and recognition based on handcrafted and deep learning feature-based techniques.

Authors:  Nermeen Nader; Fatma El-Zahraa El-Gamal; Shaker El-Sappagh; Kyung Sup Kwak; Mohammed Elmogy
Journal:  PeerJ Comput Sci       Date:  2021-12-06

3.  Automated Structural Analysis and Quantitative Characterization of Scar Tissue Using Machine Learning.

Authors:  Luluil Maknuna; Hyeonsoo Kim; Yeachan Lee; Yoonjin Choi; Hyunjung Kim; Myunggi Yi; Hyun Wook Kang
Journal:  Diagnostics (Basel)       Date:  2022-02-19

4.  Artificial neural networks (ANNs) for modeling efficient factors in predicting pap smear screening behavior change stage.

Authors:  Elahe Allahyari; Mitra Moodi; Zoya Tahergorabi
Journal:  Biomedicine (Taipei)       Date:  2022-06-01

5.  An optimized transfer learning-based approach for automatic diagnosis of COVID-19 from chest x-ray images.

Authors:  Waleed M Bahgat; Hossam Magdy Balaha; Yousry AbdulAzeem; Mahmoud M Badawy
Journal:  PeerJ Comput Sci       Date:  2021-05-27
  5 in total

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