Literature DB >> 33813651

Integrative transcriptomic and metabolomic analyses provide insight into the long-term submergence response mechanisms of young Salix variegata stems.

Qingwei Zhang1,2, Shaohu Tang3,4, Jianqiu Li3,4, Chunfen Fan3,4, Libo Xing5, Keming Luo6,7.   

Abstract

MAIN
CONCLUSION: The mechanisms underlying long-term complete submergence tolerance in S. variegata involve enhanced oxidative stress responses, strengthened ethylene and ABA signaling, synthesis of raffinose family oligosaccharides, unsaturated fatty acids, and specific stress-related amino acids. Salix variegata Franch. is a riparian shrub species that can tolerate long-term complete submergence; however, the molecular mechanisms underlying this trait remain to be elucidated. In this study, we subjected S. variegata plants to complete submergence for 60 d and collected stems to perform transcriptomic and metabolomic analyses, as well as quantitative reverse transcription-polymerase chain reaction (qRT-PCR) assays. Results revealed that photosynthesis and the response to light stimulus were inhibited during submergence and recovered after desubmergence. Ethylene and abscisic acid (ABA) signaling could be important for the long-term submergence tolerance of S. variegata. Jasmonic acid (JA) signaling also participated in the response to submergence. Raffinose family oligosaccharides, highly unsaturated fatty acids, and specific stress-related amino acids accumulated in response to submergence, indicating that they may protect plants from submergence damage, as they do in response to other abiotic stressors. Several organic acids were produced in S. variegata plants after submergence, which may facilitate coping with the toxicity induced by submergence. After long-term submergence, cell wall reorganization and phenylpropanoid metabolic processes (the synthesis of specific phenolics and flavonoids) were activated, which may contribute to long-term S. variegata submergence tolerance; however, the detailed mechanisms require further investigation. Several transcription factors (TFs), such as MYB, continuously responded to submergence, indicating that they may play important roles in the responses and adaption to submergence. Genes related to oxidative stress tolerance were specifically expressed after desubmergence, potentially contributing to recovery of S. variegata plants within a short period of time.

Entities:  

Keywords:  Oxidative stress; Phytohormones; S. variegate; Stress signaling; Submergence tolerance

Mesh:

Year:  2021        PMID: 33813651     DOI: 10.1007/s00425-021-03604-5

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  32 in total

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Review 3.  Organic acid anions: An effective defensive weapon for plants against aluminum toxicity and phosphorus deficiency in acidic soils.

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Review 4.  Diverse roles of jasmonates and ethylene in abiotic stress tolerance.

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6.  The submergence tolerance gene SUB1A delays leaf senescence under prolonged darkness through hormonal regulation in rice.

Authors:  Takeshi Fukao; Elaine Yeung; Julia Bailey-Serres
Journal:  Plant Physiol       Date:  2012-10-16       Impact factor: 8.340

Review 7.  Physiological aspects of raffinose family oligosaccharides in plants: protection against abiotic stress.

Authors:  A I ElSayed; M S Rafudeen; D Golldack
Journal:  Plant Biol (Stuttg)       Date:  2013-08-12       Impact factor: 3.081

8.  Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants.

Authors:  Daniel J Gibbs; Seung Cho Lee; Nurulhikma Md Isa; Silvia Gramuglia; Takeshi Fukao; George W Bassel; Cristina Sousa Correia; Françoise Corbineau; Frederica L Theodoulou; Julia Bailey-Serres; Michael J Holdsworth
Journal:  Nature       Date:  2011-10-23       Impact factor: 49.962

Review 9.  Submergence and Waterlogging Stress in Plants: A Review Highlighting Research Opportunities and Understudied Aspects.

Authors:  Takeshi Fukao; Blanca Estela Barrera-Figueroa; Piyada Juntawong; Julián Mario Peña-Castro
Journal:  Front Plant Sci       Date:  2019-03-22       Impact factor: 5.753

10.  Gibberellin biosynthesis and signal transduction is essential for internode elongation in deepwater rice.

Authors:  Madoka Ayano; Takahiro Kani; Mikiko Kojima; Hitoshi Sakakibara; Takuya Kitaoka; Takeshi Kuroha; Rosalyn B Angeles-Shim; Hidemi Kitano; Keisuke Nagai; Motoyuki Ashikari
Journal:  Plant Cell Environ       Date:  2014-06-24       Impact factor: 7.228

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