Literature DB >> 33801637

Asymptotic Information-Theoretic Detection of Dynamical Organization in Complex Systems.

Gianluca D'Addese1, Laura Sani2, Luca La Rocca1, Roberto Serra1,3,4, Marco Villani1,3.   

Abstract

The identification of emergent structures in complex dynamical systems is a formidable challenge. We propose a computationally efficient methodology to address such a challenge, based on modeling the state of the system as a set of random variables. Specifically, we present a sieving algorithm to navigate the huge space of all subsets of variables and compare them in terms of a simple index that can be computed without resorting to simulations. We obtain such a simple index by studying the asymptotic distribution of an information-theoretic measure of coordination among variables, when there is no coordination at all, which allows us to fairly compare subsets of variables having different cardinalities. We show that increasing the number of observations allows the identification of larger and larger subsets. As an example of relevant application, we make use of a paradigmatic case regarding the identification of groups in autocatalytic sets of reactions, a chemical situation related to the origin of life problem.

Entities:  

Keywords:  chi-squared approximation; cluster index; integration; mutual information; relevance index; relevant subset

Year:  2021        PMID: 33801637      PMCID: PMC8066289          DOI: 10.3390/e23040398

Source DB:  PubMed          Journal:  Entropy (Basel)        ISSN: 1099-4300            Impact factor:   2.524


  8 in total

1.  Detecting autocatalytic, self-sustaining sets in chemical reaction systems.

Authors:  Wim Hordijk; Mike Steel
Journal:  J Theor Biol       Date:  2004-04-21       Impact factor: 2.691

2.  A stochastic model of autocatalytic reaction networks.

Authors:  Alessandro Filisetti; Alex Graudenzi; Roberto Serra; Marco Villani; Rudolf M Füchslin; Norman Packard; Stuart A Kauffman; Irene Poli
Journal:  Theory Biosci       Date:  2011-10-07       Impact factor: 1.919

3.  The Search for Candidate Relevant Subsets of Variables in Complex Systems.

Authors:  M Villani; A Roli; A Filisetti; M Fiorucci; I Poli; R Serra
Journal:  Artif Life       Date:  2015-11-06       Impact factor: 0.667

Review 4.  Prebiotic systems chemistry: new perspectives for the origins of life.

Authors:  Kepa Ruiz-Mirazo; Carlos Briones; Andrés de la Escosura
Journal:  Chem Rev       Date:  2013-10-31       Impact factor: 60.622

5.  Functional clustering: identifying strongly interactive brain regions in neuroimaging data.

Authors:  G Tononi; A R McIntosh; D P Russell; G M Edelman
Journal:  Neuroimage       Date:  1998-02       Impact factor: 6.556

6.  A measure for brain complexity: relating functional segregation and integration in the nervous system.

Authors:  G Tononi; O Sporns; G M Edelman
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-24       Impact factor: 11.205

7.  The hypercycle. A principle of natural self-organization. Part A: Emergence of the hypercycle.

Authors:  M Eigen; P Schuster
Journal:  Naturwissenschaften       Date:  1977-11

8.  Evolution before genes.

Authors:  Vera Vasas; Chrisantha Fernando; Mauro Santos; Stuart Kauffman; Eörs Szathmáry
Journal:  Biol Direct       Date:  2012-01-05       Impact factor: 4.540

  8 in total

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