Literature DB >> 33800722

A Systematic Review of Genomic Regions and Candidate Genes Underlying Behavioral Traits in Farmed Mammals and Their Link with Human Disorders.

Amanda B Alvarenga1, Hinayah R Oliveira1,2, Shi-Yi Chen1,3, Stephen P Miller4, Jeremy N Marchant-Forde5, Lais Grigoletto1,6, Luiz F Brito1.   

Abstract

The main objectives of this study were to perform a systematic review of genomic regions associated with various behavioral traits in the main farmed mammals and identify key candidate genes and potential causal mutations by contrasting the frequency of polymorphisms in cattle breeds with divergent behavioral traits (based on a subjective clustering approach). A total of 687 (cattle), 1391 (pigs), and 148 (sheep) genomic regions associated with 37 (cattle), 55 (pigs), and 22 (sheep) behavioral traits were identified in the literature. In total, 383, 317, and 15 genes overlap with genomic regions identified for cattle, pigs, and sheep, respectively. Six common genes (e.g., NR3C2, PITPNM3, RERG, SPNS3, U6, and ZFAT) were found for cattle and pigs. A combined gene-set of 634 human genes was produced through identified homologous genes. A total of 313 out of 634 genes have previously been associated with behavioral, mental, and neurologic disorders (e.g., anxiety and schizophrenia) in humans. Additionally, a total of 491 candidate genes had at least one statistically significant polymorphism (p-value < 0.05). Out of those, 110 genes were defined as having polymorphic regions differing in greater than 50% of exon regions. Therefore, conserved genomic regions controlling behavior were found across farmed mammal species and humans.

Entities:  

Keywords:  animal welfare; behavioral genetics; cattle; domestication; livestock behavior; pigs; sheep; temperament; workability

Year:  2021        PMID: 33800722      PMCID: PMC7999279          DOI: 10.3390/ani11030715

Source DB:  PubMed          Journal:  Animals (Basel)        ISSN: 2076-2615            Impact factor:   2.752


  116 in total

1.  Influence of animal temperament and stress responsiveness on the carcass quality and beef tenderness of feedlot cattle.

Authors:  D A King; C E Schuehle Pfeiffer; R D Randel; T H Welsh; R A Oliphint; B E Baird; K O Curley; R C Vann; D S Hale; J W Savell
Journal:  Meat Sci       Date:  2006-05-19       Impact factor: 5.209

2.  Haplotypes of coping behavior associated QTL regions reveal distinct transcript profiles in amygdala and hippocampus.

Authors:  Kevin Gley; Eduard Murani; Fiete Haack; Nares Trakooljul; Manuela Zebunke; Birger Puppe; Klaus Wimmers; Siriluck Ponsuksili
Journal:  Behav Brain Res       Date:  2019-06-13       Impact factor: 3.332

3.  The scientific development that we need in the animal breeding industry.

Authors:  Pieter W Knap
Journal:  J Anim Breed Genet       Date:  2020-07       Impact factor: 2.380

4.  The use of olfactory and other cues for social recognition by juvenile pigs.

Authors:  H H. Kristensen; R B. Jones; C P. Schofield; R P. White; C M. Wathes
Journal:  Appl Anim Behav Sci       Date:  2001-06-01       Impact factor: 2.448

5.  Both TASK-3 and TREK-1 two-pore loop K channels are expressed in H295R cells and modulate their membrane potential and aldosterone secretion.

Authors:  Tanja Brenner; Kevin M O'Shaughnessy
Journal:  Am J Physiol Endocrinol Metab       Date:  2008-10-14       Impact factor: 4.310

6.  Analysis of non-synonymous SNPs of the porcine SERPINA6 gene as potential causal variants for a QTL affecting plasma cortisol levels on SSC7.

Authors:  A Görres; S Ponsuksili; K Wimmers; E Muráni
Journal:  Anim Genet       Date:  2015-03-05       Impact factor: 3.169

7.  Novel autism subtype-dependent genetic variants are revealed by quantitative trait and subphenotype association analyses of published GWAS data.

Authors:  Valerie W Hu; Anjene Addington; Alexander Hyman
Journal:  PLoS One       Date:  2011-04-27       Impact factor: 3.240

8.  Detection of genes influencing economic traits in three French dairy cattle breeds.

Authors:  Didier Boichard; Cécile Grohs; Florence Bourgeois; Frédérique Cerqueira; Rémi Faugeras; André Neau; Rachel Rupp; Yves Amigues; Marie Yvonne Boscher; Hubert Levéziel
Journal:  Genet Sel Evol       Date:  2003 Jan-Feb       Impact factor: 4.297

9.  DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants.

Authors:  Janet Piñero; Àlex Bravo; Núria Queralt-Rosinach; Alba Gutiérrez-Sacristán; Jordi Deu-Pons; Emilio Centeno; Javier García-García; Ferran Sanz; Laura I Furlong
Journal:  Nucleic Acids Res       Date:  2016-10-19       Impact factor: 16.971

10.  Deciphering Cattle Temperament Measures Derived From a Four-Platform Standing Scale Using Genetic Factor Analytic Modeling.

Authors:  Haipeng Yu; Gota Morota; Elfren F Celestino; Carl R Dahlen; Sarah A Wagner; David G Riley; Lauren L Hulsman Hanna
Journal:  Front Genet       Date:  2020-06-12       Impact factor: 4.599

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  3 in total

1.  Genetic Modeling and Genomic Analyses of Yearling Temperament in American Angus Cattle and Its Relationship With Productive Efficiency and Resilience Traits.

Authors:  Amanda B Alvarenga; Hinayah R Oliveira; Stephen P Miller; Fabyano F Silva; Luiz F Brito
Journal:  Front Genet       Date:  2022-04-04       Impact factor: 4.772

Review 2.  Behavioural Traits in Bos taurus Cattle, Their Heritability, Potential Genetic Markers, and Associations with Production Traits.

Authors:  Frances Margaret Titterington; Rachel Knox; Steven James Morrison; Masoud Shirali
Journal:  Animals (Basel)       Date:  2022-09-28       Impact factor: 3.231

3.  Haplotype-Based Single-Step GWAS for Yearling Temperament in American Angus Cattle.

Authors:  Andre C Araujo; Paulo L S Carneiro; Amanda B Alvarenga; Hinayah R Oliveira; Stephen P Miller; Kelli Retallick; Luiz F Brito
Journal:  Genes (Basel)       Date:  2021-12-22       Impact factor: 4.096

  3 in total

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