Literature DB >> 33800720

Circadian Clock Components Offer Targets for Crop Domestication and Improvement.

C Robertson McClung1.   

Abstract

During plant domestication and improvement, farmers select for alleles present in wild species that improve performance in new selective environments associated with cultivation and use. The selected alleles become enriched and other alleles depleted in elite cultivars. One important aspect of crop improvement is expansion of the geographic area suitable for cultivation; this frequently includes growth at higher or lower latitudes, requiring the plant to adapt to novel photoperiodic environments. Many crops exhibit photoperiodic control of flowering and altered photoperiodic sensitivity is commonly required for optimal performance at novel latitudes. Alleles of a number of circadian clock genes have been selected for their effects on photoperiodic flowering in multiple crops. The circadian clock coordinates many additional aspects of plant growth, metabolism and physiology, including responses to abiotic and biotic stresses. Many of these clock-regulated processes contribute to plant performance. Examples of selection for altered clock function in tomato demonstrate that with domestication, the phasing of the clock is delayed with respect to the light-dark cycle and the period is lengthened; this modified clock is associated with increased chlorophyll content in long days. These and other data suggest the circadian clock is an attractive target during breeding for crop improvement.

Entities:  

Keywords:  circadian clock; circadian rhythm; crop improvement; domestication; molecular breeding; photoperiodic flowering

Mesh:

Year:  2021        PMID: 33800720      PMCID: PMC7999361          DOI: 10.3390/genes12030374

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  205 in total

1.  Phytochrome B regulates Heading date 1 (Hd1)-mediated expression of rice florigen Hd3a and critical day length in rice.

Authors:  Ryo Ishikawa; Mayumi Aoki; Ken-Ichi Kurotani; Shuji Yokoi; Tomoko Shinomura; Makoto Takano; Ko Shimamoto
Journal:  Mol Genet Genomics       Date:  2011-04-22       Impact factor: 3.291

2.  Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice.

Authors:  Weiya Xue; Yongzhong Xing; Xiaoyu Weng; Yu Zhao; Weijiang Tang; Lei Wang; Hongju Zhou; Sibin Yu; Caiguo Xu; Xianghua Li; Qifa Zhang
Journal:  Nat Genet       Date:  2008-05-04       Impact factor: 38.330

3.  Characterization of Two Growth Period QTLs Reveals Modification of PRR3 Genes During Soybean Domestication.

Authors:  Man-Wah Li; Wei Liu; Hon-Ming Lam; Joshua M Gendron
Journal:  Plant Cell Physiol       Date:  2019-02-01       Impact factor: 4.927

4.  Natural variation in Hd17, a homolog of Arabidopsis ELF3 that is involved in rice photoperiodic flowering.

Authors:  Kazuki Matsubara; Eri Ogiso-Tanaka; Kiyosumi Hori; Kaworu Ebana; Tsuyu Ando; Masahiro Yano
Journal:  Plant Cell Physiol       Date:  2012-03-06       Impact factor: 4.927

5.  The role of a pseudo-response regulator gene in life cycle adaptation and domestication of beet.

Authors:  Pierre A Pin; Wenying Zhang; Sebastian H Vogt; Nadine Dally; Bianca Büttner; Gretel Schulze-Buxloh; Noémie S Jelly; Tansy Y P Chia; Effie S Mutasa-Göttgens; Juliane C Dohm; Heinz Himmelbauer; Bernd Weisshaar; Josef Kraus; Jan J L Gielen; Murielle Lommel; Guy Weyens; Bettina Wahl; Axel Schechert; Ove Nilsson; Christian Jung; Thomas Kraft; Andreas E Müller
Journal:  Curr Biol       Date:  2012-05-17       Impact factor: 10.834

6.  PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, together play essential roles close to the circadian clock of Arabidopsis thaliana.

Authors:  Norihito Nakamichi; Masanori Kita; Shogo Ito; Takafumi Yamashino; Takeshi Mizuno
Journal:  Plant Cell Physiol       Date:  2005-03-13       Impact factor: 4.927

7.  The Chickpea Early Flowering 1 (Efl1) Locus Is an Ortholog of Arabidopsis ELF3.

Authors:  Stephen Ridge; Amit Deokar; Robyn Lee; Ketema Daba; Richard C Macknight; James L Weller; Bunyamin Tar'an
Journal:  Plant Physiol       Date:  2017-08-17       Impact factor: 8.340

8.  Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1.

Authors:  Kazuyuki Doi; Takeshi Izawa; Takuichi Fuse; Utako Yamanouchi; Takahiko Kubo; Zenpei Shimatani; Masahiro Yano; Atsushi Yoshimura
Journal:  Genes Dev       Date:  2004-04-12       Impact factor: 11.361

Review 9.  Functional and evolutionary implications of natural variation in clock genes.

Authors:  R Costa; C P Kyriacou
Journal:  Curr Opin Neurobiol       Date:  1998-10       Impact factor: 6.627

10.  Accurate timekeeping is controlled by a cycling activator in Arabidopsis.

Authors:  Polly Yingshan Hsu; Upendra K Devisetty; Stacey L Harmer
Journal:  Elife       Date:  2013-04-30       Impact factor: 8.140

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  12 in total

1.  Putting the pea in photoPEAriod.

Authors:  Mark A Chapman
Journal:  J Exp Bot       Date:  2022-06-24       Impact factor: 7.298

2.  Circadian rhythms in the plant host influence rhythmicity of rhizosphere microbiota.

Authors:  Amy Newman; Emma Picot; Sian Davies; Sally Hilton; Isabelle A Carré; Gary D Bending
Journal:  BMC Biol       Date:  2022-10-20       Impact factor: 7.364

Review 3.  Circadian Rhythms in Legumes: What Do We Know and What Else Should We Explore?

Authors:  Hazel Marie Kugan; Nur Ardiyana Rejab; Nurul Amylia Sahruzaini; Jennifer Ann Harikrishna; Niranjan Baisakh; Acga Cheng
Journal:  Int J Mol Sci       Date:  2021-04-27       Impact factor: 5.923

Review 4.  Spectres of Clock Evolution: Past, Present, and Yet to Come.

Authors:  Maria Luísa Jabbur; Carl Hirschie Johnson
Journal:  Front Physiol       Date:  2022-02-11       Impact factor: 4.566

Review 5.  The Roles of Temperature-Related Post-Transcriptional Regulation in Cereal Floral Development.

Authors:  Dominique Hirsz; Laura E Dixon
Journal:  Plants (Basel)       Date:  2021-10-20

6.  Interaction between photoperiod and variation in circadian rhythms in tomato.

Authors:  Yanli Xiang; Thomas Sapir; Pauline Rouillard; Marina Ferrand; José M Jiménez-Gómez
Journal:  BMC Plant Biol       Date:  2022-04-09       Impact factor: 4.215

Review 7.  Realising the Environmental Potential of Vertical Farming Systems through Advances in Plant Photobiology.

Authors:  Matthieu de Carbonnel; John M Stormonth-Darling; Weiqi Liu; Dmytro Kuziak; Matthew Alan Jones
Journal:  Biology (Basel)       Date:  2022-06-16

8.  The evolution and function of the PSEUDO RESPONSE REGULATOR gene family in the plant circadian clock.

Authors:  Carlos Takeshi Hotta
Journal:  Genet Mol Biol       Date:  2022-09-16       Impact factor: 2.087

9.  Plant clock modifications for adapting flowering time to local environments.

Authors:  Akari E Maeda; Norihito Nakamichi
Journal:  Plant Physiol       Date:  2022-09-28       Impact factor: 8.005

10.  Circadian regulation of the transcriptome in a complex polyploid crop.

Authors:  Hannah Rees; Rachel Rusholme-Pilcher; Paul Bailey; Joshua Colmer; Benjamen White; Connor Reynolds; Sabrina Jaye Ward; Benedict Coombes; Calum A Graham; Luíza Lane de Barros Dantas; Antony N Dodd; Anthony Hall
Journal:  PLoS Biol       Date:  2022-10-13       Impact factor: 9.593

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