Literature DB >> 33800297

QTL Mapping for Gummy Stem Blight Resistance in Watermelon (Citrullus spp.).

Eun Su Lee1, Do-Sun Kim1, Sang Gyu Kim1, Yun-Chan Huh2, Chang-Gi Back3, Ye-Rin Lee1, Muhammad Irfan Siddique1, Koeun Han1, Hye-Eun Lee1, Jundae Lee4.   

Abstract

Watermelon (Citrulluslanatus) is an economically important fruit crop worldwide. Gummy stem blight (GSB) is one of the most damaging diseases encountered during watermelon cultivation. In the present study, we identified quantitative trait loci (QTLs) associated with GSB resistance in an F2 population derived from a cross between maternal-susceptible line '920533' (C. lanatus) and the paternal-resistant line 'PI 189225' (C. amarus). The resistance of 178 F2 plants was assessed by two different evaluation methods, including leaf lesion (LL) and stem blight (SB). To analyze the QTLs associated with GSB resistance, a linkage map was constructed covering a total genetic distance of 1070.2 cM. QTL analysis detected three QTLs associated with GSB resistance on chromosome 8 and 6. Among them, two QTLs, qLL8.1 and qSB8.1 on chromosome 8 identified as major QTLs, explaining 10.5 and 10.0% of the phenotypic variations localizing at same area and sharing the same top markers for both LL and SB traits, respectively. A minor QTL, qSB6.1, explains 9.7% of phenotypic variations detected on chromosome 6 only for the SB trait. High-throughput markers were developed and validated for the selection of resistant QTLs using watermelon accessions, and commercial cultivars. Four potential candidate genes were predicted associated with GSB resistance based on the physical location of flanking markers on chromosome 8. These findings will be helpful for the development of watermelon cultivars resistant to GSB.

Entities:  

Keywords:  gummy stem blight; high-resolution melting; linkage map; quantitative trait loci; single nucleotide polymorphism

Year:  2021        PMID: 33800297      PMCID: PMC7999335          DOI: 10.3390/plants10030500

Source DB:  PubMed          Journal:  Plants (Basel)        ISSN: 2223-7747


  24 in total

1.  MapChart: software for the graphical presentation of linkage maps and QTLs.

Authors:  R E Voorrips
Journal:  J Hered       Date:  2002 Jan-Feb       Impact factor: 2.645

2.  Monogenic Dominant Resistance to Gummy Stem Blight in Two Melon (Cucumis melo) Accessions.

Authors:  T L Zuniga; J P Jantz; T A Zitter; M K Jahn
Journal:  Plant Dis       Date:  1999-12       Impact factor: 4.438

3.  Identification and Molecular Mapping of a Gummy Stem Blight Resistance Gene in Wild Watermelon (Citrullus amarus) Germplasm PI 189225.

Authors:  Runsheng Ren; Jinhua Xu; Man Zhang; Guang Liu; Xiefeng Yao; Lingli Zhu; Qian Hou
Journal:  Plant Dis       Date:  2019-11-15       Impact factor: 4.438

4.  High-resolution genotyping by amplicon melting analysis using LCGreen.

Authors:  Carl T Wittwer; Gudrun H Reed; Cameron N Gundry; Joshua G Vandersteen; Robert J Pryor
Journal:  Clin Chem       Date:  2003-06       Impact factor: 8.327

5.  Non-synonymous single nucleotide polymorphisms in the watermelon eIF4E gene are closely associated with resistance to zucchini yellow mosaic virus.

Authors:  Kai-Shu Ling; Karen R Harris; Jenelle D F Meyer; Amnon Levi; Nihat Guner; Todd C Wehner; Abdelhafid Bendahmane; Michael J Havey
Journal:  Theor Appl Genet       Date:  2009-10-10       Impact factor: 5.699

6.  Genetic Analysis and QTL Mapping of Resistance to Gummy Stem Blight in Cucumis sativus Seedling Stage.

Authors:  Shulin Liu; Yanxia Shi; Han Miao; Min Wang; Baoju Li; Xingfang Gu; Shengping Zhang
Journal:  Plant Dis       Date:  2017-04-27       Impact factor: 4.438

7.  A GBS-SNP-based linkage map and quantitative trait loci (QTL) associated with resistance to Fusarium oxysporum f. sp. niveum race 2 identified in Citrullus lanatus var. citroides.

Authors:  Sandra E Branham; Amnon Levi; Mark W Farnham; W Patrick Wechter
Journal:  Theor Appl Genet       Date:  2016-11-01       Impact factor: 5.699

8.  Primer3--new capabilities and interfaces.

Authors:  Andreas Untergasser; Ioana Cutcutache; Triinu Koressaar; Jian Ye; Brant C Faircloth; Maido Remm; Steven G Rozen
Journal:  Nucleic Acids Res       Date:  2012-06-22       Impact factor: 16.971

9.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

10.  Gummy Stem Blight Resistance in Melon: Inheritance Pattern and Development of Molecular Markers.

Authors:  Md Zahid Hassan; Md Abdur Rahim; Sathishkumar Natarajan; Arif Hasan Khan Robin; Hoy-Taek Kim; Jong-In Park; Ill-Sup Nou
Journal:  Int J Mol Sci       Date:  2018-09-25       Impact factor: 5.923

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  1 in total

1.  QTL associated with Gummy Stem Blight (GSB) resistance in watermelon.

Authors:  Jeong-Eui Hong; Mohammad Rashed Hossain; Hee-Jeong Jung; Ill-Sup Nou
Journal:  BMC Genomics       Date:  2022-09-03       Impact factor: 4.547

  1 in total

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