Literature DB >> 33800128

Ambiguity about Splicing Factor 3b Subunit 3 (SF3B3) and Sin3A Associated Protein 130 (SAP130).

Paula I Metselaar1, Celine Hos1, Olaf Welting1, Jos A Bosch2,3, Aletta D Kraneveld4, Wouter J de Jonge1, Anje A Te Velde1.   

Abstract

In 2020, three articles were published on a protein that can activate the immune system by binding to macrophage-inducible C-type lectin receptor (Mincle). In the articles, the protein was referred to as 'SAP130, a subunit of the histone deacetylase complex.' However, the Mincle ligand the authors aimed to investigate is splicing factor 3b subunit 3 (SF3B3). This splicing factor is unrelated to SAP130 (Sin3A associated protein 130, a subunit of the histone deacetylase-dependent Sin3A corepressor complex). The conclusions in the three articles were formulated for SF3B3, while the researchers used qPCR primers and antibodies against SAP130. We retraced the origins of the ambiguity about the two proteins and found that Online Mendelian Inheritance in Man (OMIM) added a Nature publication on SF3B3 as a reference for Sin3A associated protein 130 in 2016. Subsequently, companies such as Abcam referred to OMIM and the Nature article in their products for both SF3B3 and SAP130. In turn, the mistake by OMIM followed in the persistent and confusing use of 'SAP130' (spliceosome-associated protein 130) as an alternative symbol for SF3B3. With this report, we aim to eliminate the persistent confusion and separate the literature regarding the two proteins.

Entities:  

Keywords:  SAP130; SF3B3; Sin3A associated protein 130; spliceosome-associated protein 130; splicing factor 3b subunit 3

Year:  2021        PMID: 33800128      PMCID: PMC7999425          DOI: 10.3390/cells10030590

Source DB:  PubMed          Journal:  Cells        ISSN: 2073-4409            Impact factor:   6.600


  21 in total

1.  Mincle signaling in the innate immune response after traumatic brain injury.

Authors:  Juan Carlos de Rivero Vaccari; Frank J Brand; Aldo F Berti; Ofelia F Alonso; M Ross Bullock; Juan Pablo de Rivero Vaccari
Journal:  J Neurotrauma       Date:  2014-12-10       Impact factor: 5.269

2.  Mincle Signaling Promotes Con A Hepatitis.

Authors:  Stephanie H Greco; Alejandro Torres-Hernandez; Aleksandr Kalabin; Clint Whiteman; Rae Rokosh; Sushma Ravirala; Atsuo Ochi; Johana Gutierrez; Muhammad Atif Salyana; Vishnu R Mani; Savitha V Nagaraj; Michael Deutsch; Lena Seifert; Donnele Daley; Rocky Barilla; Mautin Hundeyin; Yuriy Nikifrov; Karla Tejada; Bruce E Gelb; Steven C Katz; George Miller
Journal:  J Immunol       Date:  2016-08-24       Impact factor: 5.422

3.  Spliceosome-Associated Protein 130 Exacerbates Alcohol-Induced Liver Injury by Inducing NLRP3 Inflammasome-Mediated IL-1β in Mice.

Authors:  Jong-Won Kim; Yoon-Seok Roh; Hyeneui Jeong; Ho-Keun Yi; Min-Ho Lee; Chae-Woong Lim; Bumseok Kim
Journal:  Am J Pathol       Date:  2018-01-31       Impact factor: 4.307

Review 4.  Proteoglycan 4: From Mere Lubricant to Regulator of Tissue Homeostasis and Inflammation: Does proteoglycan 4 have the ability to buffer the inflammatory response?

Authors:  Nabangshu Das; Tannin A Schmidt; Roman J Krawetz; Antoine Dufour
Journal:  Bioessays       Date:  2018-11-28       Impact factor: 4.345

5.  IRAKM-Mincle axis links cell death to inflammation: Pathophysiological implications for chronic alcoholic liver disease.

Authors:  Hao Zhou; Minjia Yu; Junjie Zhao; Bradley N Martin; Sanjoy Roychowdhury; Megan R McMullen; Emily Wang; Paul L Fox; Sho Yamasaki; Laura E Nagy; Xiaoxia Li
Journal:  Hepatology       Date:  2016-10-25       Impact factor: 17.425

6.  Preliminary exploration of the potential of spliceosome-associated protein 130 for predicting disease severity in Crohn's disease.

Authors:  Wenbin Gong; Kun Guo; Tao Zheng; Miao Fang; Haohao Xie; Weijie Li; Zhiwu Hong; Huajian Ren; Guosheng Gu; Gefei Wang; Zhiming Wang; Xiuwen Wu; Jianan Ren
Journal:  Ann N Y Acad Sci       Date:  2019-10-03       Impact factor: 5.691

Review 7.  Neutrophil cell surface receptors and their intracellular signal transduction pathways.

Authors:  Krisztina Futosi; Szabina Fodor; Attila Mócsai
Journal:  Int Immunopharmacol       Date:  2013-08-30       Impact factor: 4.932

8.  C-type lectin receptors Mcl and Mincle control development of multiple sclerosis-like neuroinflammation.

Authors:  Marie N'diaye; Susanna Brauner; Sevasti Flytzani; Lara Kular; Andreas Warnecke; Milena Z Adzemovic; Eliane Piket; Jin-Hong Min; Will Edwards; Filia Mela; Hoi Ying Choi; Vera Magg; Tojo James; Magdalena Linden; Holger M Reichardt; Michael R Daws; Jack van Horssen; Ingrid Kockum; Robert A Harris; Tomas Olsson; Andre O Guerreiro-Cacais; Maja Jagodic
Journal:  J Clin Invest       Date:  2020-01-13       Impact factor: 14.808

9.  Association of SAP130/SF3b-3 with Cullin-RING ubiquitin ligase complexes and its regulation by the COP9 signalosome.

Authors:  Suchithra Menon; Tomohiko Tsuge; Naoshi Dohmae; Koji Takio; Ning Wei
Journal:  BMC Biochem       Date:  2008-01-03       Impact factor: 4.059

10.  Microglial Mincle receptor in the PVN contributes to sympathetic hyperactivity in acute myocardial infarction rat.

Authors:  Yu Wang; Jie Yin; Cailing Wang; Hesheng Hu; Xiaolu Li; Mei Xue; Ju Liu; Wenjuan Cheng; Ye Wang; Yan Li; Yugen Shi; Jiayu Tan; Xinran Li; Fuhong Liu; Qiang Liu; Suhua Yan
Journal:  J Cell Mol Med       Date:  2018-10-24       Impact factor: 5.310

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  1 in total

1.  The risks of using unapproved gene symbols.

Authors:  Bryony Braschi; Ruth L Seal; Susan Tweedie; Tamsin E M Jones; Elspeth A Bruford
Journal:  Am J Hum Genet       Date:  2021-10-07       Impact factor: 11.025

  1 in total

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