Literature DB >> 33799595

A Microfluidic Device for Automated High Throughput Detection of Ice Nucleation of Snomax®.

Priyatanu Roy1, Margaret L House2, Cari S Dutcher1,2.   

Abstract

Measurement of ice nucleation (IN) temperature of liquid solutions at sub-ambient temperatures has applications in atmospheric, water quality, food storage, protein crystallography and pharmaceutical sciences. Here we present details on the construction of a temperature-controlled microfluidic platform with multiple individually addressable temperature zones and on-chip temperature sensors for high-throughput IN studies in droplets. We developed, for the first time, automated droplet freezing detection methods in a microfluidic device, using a deep neural network (DNN) and a polarized optical method based on intensity thresholding to classify droplets without manual counting. This platform has potential applications in continuous monitoring of liquid samples consisting of aerosols to quantify their IN behavior, or in checking for contaminants in pure water. A case study of the two detection methods was performed using Snomax® (Snomax International, Englewood, CO, USA), an ideal ice nucleating particle (INP). Effects of aging and heat treatment of Snomax® were studied with Fourier transform infrared (FTIR) spectroscopy and a microfluidic platform to correlate secondary structure change of the IN protein in Snomax® to IN temperature. It was found that aging at room temperature had a mild impact on the ice nucleation ability but heat treatment at 95 °C had a more pronounced effect by reducing the ice nucleation onset temperature by more than 7 °C and flattening the overall frozen fraction curve. Results also demonstrated that our setup can generate droplets at a rate of about 1500/min and requires minimal human intervention for DNN classification.

Entities:  

Keywords:  Snomax®; automated detection; deep neural network; high-throughput; ice nucleating particle; machine learning; microfluidic device; polarized light

Year:  2021        PMID: 33799595      PMCID: PMC7998955          DOI: 10.3390/mi12030296

Source DB:  PubMed          Journal:  Micromachines (Basel)        ISSN: 2072-666X            Impact factor:   2.891


  35 in total

1.  Independent control of drop size and velocity in microfluidic flow-focusing generators using variable temperature and flow rate.

Authors:  Claudiu A Stan; Sindy K Y Tang; George M Whitesides
Journal:  Anal Chem       Date:  2009-03-15       Impact factor: 6.986

2.  Advances in understanding damage by salt crystallization.

Authors:  Rosa M Espinosa-Marzal; George W Scherer
Journal:  Acc Chem Res       Date:  2010-06-15       Impact factor: 22.384

3.  Measurements of Immersion Freezing and Heterogeneous Chemistry of Atmospherically Relevant Single Particles with Micro-Raman Spectroscopy.

Authors:  Liora E Mael; Heidi Busse; Vicki H Grassian
Journal:  Anal Chem       Date:  2019-08-19       Impact factor: 6.986

4.  On-chip analysis of atmospheric ice-nucleating particles in continuous flow.

Authors:  Mark D Tarn; Sebastien N F Sikora; Grace C E Porter; Bethany V Wyld; Matan Alayof; Naama Reicher; Alexander D Harrison; Yinon Rudich; Jung-Uk Shim; Benjamin J Murray
Journal:  Lab Chip       Date:  2020-07-14       Impact factor: 6.799

Review 5.  Protein Crystallization.

Authors:  Alexander McPherson
Journal:  Methods Mol Biol       Date:  2017

6.  Inhibition of Bacterial Ice Nucleators Is Not an Intrinsic Property of Antifreeze Proteins.

Authors:  Ralph Schwidetzky; Anna T Kunert; Mischa Bonn; Ulrich Pöschl; Hans Ramløv; Arthur L DeVries; Janine Fröhlich-Nowoisky; Konrad Meister
Journal:  J Phys Chem B       Date:  2020-06-02       Impact factor: 2.991

7.  The Role of Protein Loss and Denaturation in Determining Outcomes of Heat, Cryotherapy and Irreversible Electroporation on Cardiomyocytes.

Authors:  Feng Liu; Priyatanu Roy; Qi Shao; Chunlan Jiang; Jeunghwan Choi; Connie Chung; Dushyant Mehra; Dr John Bischof
Journal:  J Biomech Eng       Date:  2018-02-17       Impact factor: 2.097

8.  Molecular characterization of an ice nucleation protein variant (inaQ) from Pseudomonas syringae and the analysis of its transmembrane transport activity in Escherichia coli.

Authors:  Qianqian Li; Qi Yan; Jinsi Chen; Yan He; Jing Wang; Hongxing Zhang; Ziniu Yu; Lin Li
Journal:  Int J Biol Sci       Date:  2012-09-01       Impact factor: 6.580

9.  Novel dimeric β-helical model of an ice nucleation protein with bridged active sites.

Authors:  Christopher P Garnham; Robert L Campbell; Virginia K Walker; Peter L Davies
Journal:  BMC Struct Biol       Date:  2011-09-27

10.  Ultrarapid Inductive Rewarming of Vitrified Biomaterials with Thin Metal Forms.

Authors:  Navid Manuchehrabadi; Meng Shi; Priyatanu Roy; Zonghu Han; Jinbin Qiu; Feng Xu; Tian Jian Lu; John Bischof
Journal:  Ann Biomed Eng       Date:  2018-06-19       Impact factor: 3.934

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