Literature DB >> 33799506

Novel Cyclic Peptides from Lethal Amanita Mushrooms through a Genome-Guided Approach.

Shengwen Zhou1,2,3,4, Xincan Li1,2,4, Yunjiao Lüli1,2,4, Xuan Li5, Zuo H Chen6, Pengcheng Yuan1,2,3,4, Zhu L Yang1,2, Guohong Li3, Hong Luo1,2.   

Abstract

Most species in the genus Amanita are ectomycorrhizal fungi comprising both edible and poisonous mushrooms. Some species produce potent cyclic peptide toxins, such as α-amanitin, which places them among the deadliest organisms known to mankind. These toxins and related cyclic peptides are encoded by genes of the "MSDIN" family (named after the first five amino acid residues of the precursor peptides), and it is largely unknown to what extent these genes are expressed in the basidiocarps. In the present study, Amanita rimosa and Amanita exitialis were sequenced through the PacBio and Illumina techniques. Together with our two previously sequenced genomes, Amanita subjunquillea and Amanita pallidorosea, in total, 46 previously unknown MSDIN genes were discovered. The expression of over 80% of the MSDIN genes was demonstrated in A. subjunquillea. Through a combination of genomics and mass spectrometry, 12 MSDIN genes were shown to produce novel cyclic peptides. To further confirm the results, three of the cyclic peptides were chemically synthesized. The tandem mass spectrometry (MS/MS) spectra of the natural and the synthetic peptides shared a majority of the fragment ions, demonstrating an identical structure between each peptide pair. Collectively, the results suggested that the genome-guided approach is reliable for identifying novel cyclic peptides in Amanita species and that there is a large peptide reservoir in these mushrooms.

Entities:  

Keywords:  Amanitin; LC–HRMS; MSDIN family; genome; poisonous mushroom

Year:  2021        PMID: 33799506      PMCID: PMC7998459          DOI: 10.3390/jof7030204

Source DB:  PubMed          Journal:  J Fungi (Basel)        ISSN: 2309-608X


  31 in total

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Journal:  Nat Biotechnol       Date:  2015-02-18       Impact factor: 54.908

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Authors:  Heather E Hallen; Hong Luo; John S Scott-Craig; Jonathan D Walton
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-19       Impact factor: 11.205

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Authors:  Katrin Letschert; Heinz Faulstich; Daniela Keller; Dietrich Keppler
Journal:  Toxicol Sci       Date:  2006-02-22       Impact factor: 4.849

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Authors:  Fabienne Meier-Abt; Heinz Faulstich; Bruno Hagenbuch
Journal:  Biochim Biophys Acta       Date:  2004-07-01

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Authors:  Z Wieczorek; I Z Siemion; M Zimecki; E Bolewska-Pedyczak; T Wieland
Journal:  Peptides       Date:  1993 Jan-Feb       Impact factor: 3.750

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Authors:  I Z Siemion; A Pedyczak; J Trojnar; M Zimecki; Z Wieczorek
Journal:  Peptides       Date:  1992 Nov-Dec       Impact factor: 3.750

9.  MS-GF+ makes progress towards a universal database search tool for proteomics.

Authors:  Sangtae Kim; Pavel A Pevzner
Journal:  Nat Commun       Date:  2014-10-31       Impact factor: 14.919

10.  Expansion and diversification of the MSDIN family of cyclic peptide genes in the poisonous agarics Amanita phalloides and A. bisporigera.

Authors:  Jane A Pulman; Kevin L Childs; R Michael Sgambelluri; Jonathan D Walton
Journal:  BMC Genomics       Date:  2016-12-15       Impact factor: 3.969

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  2 in total

1.  Genes and evolutionary fates of the amanitin biosynthesis pathway in poisonous mushrooms.

Authors:  Hong Luo; Heather E Hallen-Adams; Yunjiao Lüli; R Michael Sgambelluri; Xuan Li; Miranda Smith; Zhu L Yang; Francis M Martin
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-09       Impact factor: 12.779

2.  Differential Expression of Amanitin Biosynthetic Genes and Novel Cyclic Peptides in Amanita molliuscula.

Authors:  Yunjiao Lüli; Shengwen Zhou; Xuan Li; Zuohong Chen; Zhuliang Yang; Hong Luo
Journal:  J Fungi (Basel)       Date:  2021-05-14
  2 in total

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