| Literature DB >> 33796728 |
Eunkyung Choi1, Tae-Eul Im1, Seung Jae Lee1, Euna Jo1, Jinmu Kim1, Sun Hee Kim1,2, Young Min Chi1, Jeong-Hoon Kim3, Hyun Park1.
Abstract
The complete mitochondrial genome of Trematomus loennbergii was studied using NGS technology with PacBio platform. The mitochondrial genome size was 19,374bp and it had 13 protein-coding genes, 22 tRNAs and 2 rRNAs. There were 4 types of stop codons which were TAA, TAG, AGG and T(AA) but start codon type was only one (ATG). The contents of GC were 44.09% and AT contents were 55.91%. To conduct phylogenetic analysis, 12 species in 3 families were used. The result suggested that T. loennbergii was close to Pagothenia borchgrevinki in Nototheniidae. This study would provide a fundamental data for molecular evolution of T. loennbergii.Entities:
Keywords: Mitochondrial genome; PacBio; Scaly rockcod; Trematomus loennbergii
Year: 2021 PMID： 33796728 PMCID： PMC7995823 DOI： 10.1080/23802359.2021.1899070
Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN： 2380-2359 Impact factor: 0.658