| Literature DB >> 33796480 |
Ji-Hae Park1, Dahee Shim1, Keu Eun San Kim1, Wonsik Lee2, Sung Jae Shin1.
Abstract
Mycobacterium tuberculosis (Mtb) causes chronic granulomatous lung disease in humans. Recently, novel strategies such as host-directed therapeutics and adjunctive therapies that enhance the effect of existing antibiotics have emerged to better control Mtb infection. Recent advances in understanding the metabolic interplay between host immune cells and pathogens have provided new insights into how their interactions ultimately influence disease outcomes and antibiotic-treatment efficacy. In this review, we describe how metabolic cascades in immune environments and relevant metabolites produced from immune cells during Mtb infection play critical roles in the progression of diseases and induction of anti-Mtb protective immunity. In addition, we introduce how metabolic alterations in Mtb itself can lead to the development of persister cells that are resistant to host immunity and can eventually evade antibiotic attacks. Further understanding of the metabolic link between host cells and Mtb may contribute to not only the prevention of Mtb persister development but also the optimization of host anti-Mtb immunity together with enhanced efficacy of existing antibiotics. Overall, this review highlights novel approaches to improve and develop host-mediated therapeutic strategies against Mtb infection by restoring and switching pathogen-favoring metabolic conditions with host-favoring conditions.Entities:
Keywords: Mycobacterium; adjuvant therapy; host-directed therapy; immune cells; metabolism
Mesh:
Year: 2021 PMID: 33796480 PMCID: PMC8007978 DOI: 10.3389/fcimb.2021.635335
Source DB: PubMed Journal: Front Cell Infect Microbiol ISSN: 2235-2988 Impact factor: 5.293
Figure 1M1-to-M2 transition of Mtb-infected macrophages with metabolic reprogramming. In the early stage of Mtb infection, macrophages activate into pro-inflammatory M1 macrophages with metabolic reprogramming called the “Warburg effect.” Mtb-infected M1 macrophages have increased glycolytic capacity with excessive glucose entry through glucose transporters (GLUT). After glycolysis, glucose is degraded into pyruvate, which is used for the TCA cycle in mitochondria. Following M1 activation, the TCA cycle is blocked, which is accompanied by aconitate and succinate accumulation. Itaconate, which is driven by aconitate in Mtb-infected M1 macrophages, has anti-mycobacterial effects. Excessive succinate levels inhibit HIF prolyl-hydroxylases (PHD) and stabilization of HIF-1α. NOS2, a marker of M1 macrophages, is also expressed in Mtb-infected M1 macrophages to produce nitric oxide (NO) through arginine metabolism. Increased nitric oxide inhibits the ETC and activates reactive oxygen/nitrogen species (ROS/RNS). HIF-1α is also activated by ROS and RNS. Activated HIF-1α induces the transcription of glycolytic genes and Il-1b for boosting glycolysis, lactate production, and anti-mycobacterial immune responses, respectively. Intracellular Mtb induces miR-21 expression for inhibiting both glycolysis and IL-1β secretion by repressing Pfk-m transcription. When pyruvate is converted to citrate, citrate is further metabolized to acetyl-coenzyme A (AcCoA), which acts backbone for ketogenesis and de novo lipogenesis. During ketogenesis, D-3-hydrobutyrate (3HB) is generated from AcCoA and stimulates GPR109A for inducing de novo lipogenesis. Elevated de novo lipogenesis in Mtb-infected M1 macrophages generates the accumulation of lipid bodies, which are closely associated with intracellular Mtb. Thus, lipid-laden cells, which have a bubble-like morphology in the cytosol, are called “foamy” macrophages. In the late stage of Mtb infection, Mtb-infected M1 macrophages transition into anti-inflammatory M2 macrophages via mycobacterial components such as ESAT-6 and HSP16.3. These Mtb-infected M2 macrophages secrete anti-inflammatory cytokines such as IL-10 and TGF-β. Arginase, which is a marker of M2 macrophages, is also expressed in Mtb-infected M2 macrophages and acts on arginine metabolism to reduce NO generation. PGC-1β modulates mitochondrial biosynthesis to promote OXPHOS. PPARα induces the transcription of genes encoding lipid transporters and scavenger receptors to increase exogenous lipid utilization. Exogenous lipids are internalized by scavenger receptors in Mtb-infected M2 macrophages and generate free fatty acids, which are converted to fatty acyl CoA and translocated into the mitochondria in a carnitine palmitoyltransferase (CPT)-dependent manner. In Mtb-infected M2 macrophages, mitochondrial respiration, including β-oxidation and OXPHOS, are upregulated to maintain anti-inflammatory responses. Collectively, Mtb infection elicits metabolic reprogramming and modulates immune responses via M1-to-M2 macrophage transition.
Figure 2Metabolism of macrophages is beneficial to host defense or pathogen survival of during Mtb infection. HIF-1α, which is expressed in macrophage infected with Mtb, lowers the level of pyruvate by upregulating lactate dehydrogenase-A (LDH) and producing lactate. Pyruvate is a carbon source for Mtb and is used for proliferation. Thus, lowering the pyruvate level is advantageous for host defense. The glycolysis induced by Mtb infection limits Mtb survival through IL-1β induction. Elevated glycolytic flux and downregulated succinate dehydrogenase (SDH) in Mtb-infected macrophages triggers succinate accumulation. Succinate exhibits a pro-inflammatory reaction by inducing HIF-1α activation and IL-1β production. The pro-inflammatory mitochondrial ROS produced by succinate oxidation can limit necroptosis and Mtb replication by lowering ROS levels with nicotinamide adenine dinucleotide (NAD+) supplements. The enzymes participating in the TCA cycle and oxidative phosphorylation (OXPHOS) of macrophages infected with Mtb are downregulated. Itaconate inhibits SDH-mediated oxidation to increase succinate levels and induce IRG1-mediated anti-inflammatory responses. Arginase-1 (Arg1) contributes to the survival of pathogens in the early stages of infection, but controls infections during chronic infection. In macrophages, IDO-mediated tryptophan depletion induces immune tolerance, whereas inhibition of tryptophan synthesis using a specific gene deficiency in Mtb has a synergistic effect on Mtb growth inhibition. Macrophages infected with Mtb promote intracellular lipid metabolism to promote lipid droplet (LD) formation and differentiation into “foamy” macrophages, a characteristic of granulomas. This process is dependent on de novo cholesterol and fatty acid synthesis (FAS). Autophagy inhibited by the miR-33 locus blocks lipid catabolism and promotes cellular lipid accumulation. LD components, such as triacylglycerol (TAG) and cholesterol ester (CE), are nutrient sources for Mtb. Statins that inhibit cholesterol biosynthesis in hosts with chronic Mtb infection can be a host-directed drug target. Since the production of lipoxin A4 (LXA4) in Mtb-infected macrophages induces necrosis and prostaglandin E2 (PGE2) induces apoptosis, preferential PGE2 synthesis in the host may be an important host-directed therapy (HDT) for antimycobacterial responses. The blue pathway should be enhanced, and the red pathway weakened in favor of the host. In the immune metabolism of host cells infected by Mtb, increased expression and activity are green, and decreased expression and activity are purple.
Metabolic reprogramming in host cells during Mtb infection.
| Pathway | Metabolite | Molecule | Model | Outcomes and interpretation | Effect on host immune cells | Proposed HDT strategy | Ref. |
|---|---|---|---|---|---|---|---|
| Glycolysis | Lactate | Human AM, human MDM, murine BMDM |
Increased lactate Activation of intracellular glycolytic flux | Glycolysis upregulation is critical for host defense | LDH upregulated by HIF-α and induction of efficient Warburg effect are important in host immunity | ( | |
| Lactate, pyruvate | HIF-1α, LDH | Mouse BMDM |
Increased lactate, decreased pyruvate HIF-1α converts pyruvate to lactate | Pyruvate downregulation is critical for host defense | ( | ||
| Supernatant fluid of Mtb-infected human primary cells and THP-1 cells |
Decreased lactate, decreased pyruvate Decreased glycolysis metabolism in late infection | Destruction of host adaptive immune response by Mtb | ( | ||||
| TCA cycle | SDH | HEK293 cells | Succinate accumulation by | Induction of HIF-1α, Warburg effect and pro-inflammatory response | A treatment strategy is needed to prevent lung damage by controlling hyperinflammation through SDH inhibition | ( | |
| Itaconate | IRG1 | Mouse BMDM |
Expression of itaconate and IRG1 Irg1 modulates inflammatory responses in the lung after Mtb infection | Irg1 is essential for host resistance to Mtb | Itaconate treatment can be a treatment strategy to prevent lung damage during chronic inflammation | ( | |
| IRG1 | Mouse BMDM |
Increased itaconate, succinate Succinate increase by SDH-mediated oxidation inhibition by itaconate | IGR1-mediated anti-inflammatory response | ( | |||
| IRG1, ICL | Mtb culture | Itaconate inhibits Mtb ICL | Antimicrobial activity of macrophages | ( | |||
| Mitochondria Respiration | ROS | TNT | Mtb infected THP-1 cells |
ROS levels are up to 3 times increased Mitochondrial ROS is produced by dependence on TNT | Mitochondrial damage induced by TNT during macrophage necroptosis | ROS reduction by NAD+ supplementation is an HDT strategy to reduce necroptosis and limit Mtb replication | ( |
| Lipid | FFA and CL | PMA-differentiated THP-1 cells |
Increased FFA and CL virMtb infection stimulates | Allow Mtb survival and persistence in the host | Inhibition of miR-33 locus expression, which contributes to LD accumulation in macrophages, and induction of PGE2 and LXB4 production support host immunity | ( | |
| Fatty acid β-oxidation | Micro RNA miR-33 locus in macrophage | THP-1 macrophage |
Inducing the micro RNA miR-33 locus FAO damage by expression of micro RNA miR-33 locus by Mtb | Enhancement of lipid store in hosts preferred by mycobacteria | ( | ||
| Lipid droplet | IFN-γ, | Lung lesion of mice |
IFN-γ signaling is required for LD formation during Mtb IFN-γ driven LD formation supports the production of host protective eicosanoids including PGE2 and LXB4 | LDs support host immunity in Mtb infected macrophages | ( | ||
| Amino acid | Arginine | Arg1 | Mouse TB lung granulomas | Arg1 expression in hypoxic granulomas reduces T Cell proliferation | Arg1 inhibits bacterial growth in granulomas in TB | Arg1 expression is important for TB control in pulmonary granulomas | ( |
| Tryptophan, kynurenine | IDO | TB patient plasma | In MDR-TB, the IDO enzyme degrades tryptophan to increase kynurenine levels | Patients with high IDO levels are at higher risk for MDR-TB | Prevention of immune tolerance by blockade of tryptophan catabolism may be a strategy for HDT for TB | ( |
AM, alveolar macrophages; Arg1, arginase1; CL, cholesterol; FAO, fatty acid oxidation; FFA, free fatty acids; HIF-1, hypoxia-inducible factor 1; ICL, isocitrate lyase; IDO, indole amine 2,3-dioxigenase; IFN, interferon; IRG1, immune-responsive gene 1; LD, lipid droplet; LDH, lactate dehydrogenase; LXB4, lipoxin B4; MDM, monocyte-derived macrophages; MDR, multidrug-resistant; Mtb, Mycobacterium tuberculosis; PGE2, prostaglandin E2; PMA, phorbol 12-myristate 13-acetate; SDH, succinate dehydrogenase; TB, tuberculosis; TCA cycle, tricarboxylic acid cycle; TNT, tuberculosis necrotizing toxin; virMtb, virulent Mycobacterium tuberculosis.
Metabolic strategies of Mtb for survival within macrophages.
| Category | Bacterial factors | Biological process | Molecular function | Implications | Ref. |
|---|---|---|---|---|---|
| Survival factors | Central carbon metabolism | Glycolysis, PPP, TCA cycle, glyoxylate shunt, methylcitrate cycle, gluconeogenesis | Core feature to provide energy | The main metabolic network that sustains Mtb survival | ( |
| Virulence factors | Various genes and proteins | Lipid and fatty acid metabolism, Cell envelope proteins, proteins inhibiting antimicrobial effectors of the macrophage, protein kinases, proteases, metal-transporter proteins, gene expression regulators | Evolution of various virulence factors to modulate host immune response | Essential bacterial genes/proteins for the virulence of MTBC species | ( |
| Growth factor | Rv3722c | Aspartate-dependent nitrogen metabolism | Rv3722c as primary aspartate aminotransferase mediates nitrogen distribution | The gene | ( |
| Drug resistance factor | TreS | Trehalose metabolism remodeling | PLB and MDR-Mtb use trehalose to maintain ATP levels | Reduce the efficacy of BDQ by remodeling trehalose metabolism | ( |
| Glycerol-3-kinase required for glycerol catabolism | Variation in the | Reduction of antibiotic efficacy and resistance by metabolic mutation of glycerol catabolism | ( | ||
| Alteration of propionyl-CoA metabolism | Confers conditional drug tolerance of | ( | |||
| PptT (encoded by | PptT is involved in AcCoA metabolism to synthesize cell wall lipid | PptH mutations that deactivate the PptT reaction cause antimycobacterial resistance | Inducing antibiotic resistance mechanism through self-destructive reaction of Mtb | ( | |
| Accumulation of TAG | Quiescent metabolic activity by limitation of TCA cycle activity | Mtb of drug-resistant persister cells with accumulated TAG | ( | ||
| Immune regulation factor | TDM, Ac2SGL, PIM, LM | Rich cell wall lipids | Enhanced immunopathology | Modulation of host immune pathological response by Mtb cell wall lipid | ( |
| PDIM, MA, SL-1, LAM, Man-LAM, DAT, PAT | Dampened immunopathology | ||||
| LD accumulation in macrophage for Mtb persistence | Mtb induces FM formation in macrophage |
Mtb converts the glycolytic pathway of host cell metabolism into 3HB synthesis Accumulation of LD by anti-lipolytic ability of 3HB | LDs serve as nutrients and secure niche for Mtb | Targeting host lipid metabolic pathways perturbed by Mtb may provide TB chemotherapy | ( |
| Mtb modulates autophagy and LD accumulation | miR-33, expressed during macrophage infection by Mtb, inhibits autophagy, lysosomal function, and FAO | Mtb persists by avoiding lysosome degradation and establishing a lipid riche niche | ( | ||
| Mtb factor using host metabolites as nutrients | Rv2498c |
Dissimilation of itaconate to produce AcCoA and pyruvate Catabolism of leucine to produce AcCoA and acetoacetate | Rv2498c as a bifunctional β-hydroxyacyl-CoA lyase |
MTB mechanism for resistance to itaconate, an antimicrobial agent in the host and a modulator of the inflammatory response Using host-derived molecules as nutrients by functional enzyme in Mtb | ( |
3HB, 3-hydroxybutyrate; Ac2SGL, diacylated sulphoglycolipid; ATP, adenosine triphosphate; BDQ, bedaquiline; CoA, coenzyme A; DAT, diacyltrehalose; FAO, fatty acid oxidation; FM, foamy macrophage; LAM, lipoarabinomannan; LD, lipid droplet; LM, lipomannan; MA, mycolic acids; Man-LAM, mannose-capped lipoarabinomannan; MDR, multidrug-resistant; MTBC, Mycobacterium tuberculosis complex; PAT, polyacyltrehalose; PDIM, phthiocerol dimycocerosate; PIM, phosphatidyl inositol; PLB, Mtb persister-like bacilli; PPP, pentose phosphate pathway; PptH, ppt hydrolase; PptT, phosphopantetheinyl transferase; SL-1, sulpholipid-1; TDM, trehalose dimycolate.
Figure 3Mtb metabolism for survival and antibiotic defense in host cells. The Mtb survival strategy using host metabolism is shown as a red line. Mtb preferentially utilizes host pyruvate for intracellular proliferation. Similarly, lactate produced by glycolysis in the host is used for pathogens. Mtb Rv2498c decomposes itaconate to produce AcCoA and pyruvate, and leucine decomposes to produce AcCoA and acetoacetate, which are used as a nutrient source for Mtb. Lipid bodies in macrophages mainly consist of triacylglycerol (TAG) and cholesterol esters (CE) and can be a source of nutrients and components for Mtb. Inhibition of Mtb growth is shown as a blue line. Itaconate, a macrophage metabolite produced during the inflammatory response of Mtb-infected hosts, inhibits bacterial isocitrate lyse (ICL), a key enzyme in the glyoxylate cycle of mycobacteria. Antibiotic-resistant bacteria inhibit metabolism in antiseptic antibiotic treatment, but antibiotic susceptibility can be improved by using metabolic adjuvants to activate central carbon metabolism. Antibiotic resistance from altered Mtb metabolism and metabolism-related genes are shown as purple lines. Mutations in the glpk coding sequence reduce antibiotic efficacy and contribute to a drug-tolerant phenotype. PrpR mutations alter propionyl-CoA metabolism, resulting in attenuated antibiotic efficacy and induced multiple drug resistance. The Mtb killing effect is enhanced by an enzyme encoded with Ppt hydrolase (pptH) that hydrolyzes phosphopantetheinyl transferase (PptT) present in the CoA pathway. However, rv2795c loss-of-function mutations in Mtb confer resistance to antibiotics.
Metabolic biomarkers of mycobacterial infection.
| Biomarker | Study subjects | Purpose | Implications | Ref. |
|---|---|---|---|---|
| C26 and four mycocerosates | Sputum of 112 patients with TB | TB diagnosis | Positive correlation with TB patients | ( |
| Six mycocerosates | Sputum of 32 patients with TB from South Africa | Positive correlation with TB patients | ( | |
| MAs | Sputum of 70 patients with pulmonary TB | Positive correlation with TB patients | ( | |
| Trehalose-6-mycolate, phosphatidylinositol, resolvins | Plasma of 17 patients with TB disease and an asymptomatic | Largely upregulated in patients with TB disease | ( | |
| LAM | Urine of 48 patients with TB | Positive correlation with TB patients | ( | |
| Tryptophan/kynurenine ratio with ADA | Serum of 156 patients with tuberculous pleurisy or malignant pleurisy | Distinguish TPE from MPE diseases | Lower tryptophan level and higher level of kynurenine in TPE | ( |
| Lipid metabolites including PG (16:0/18:1), LPI (18:0) and Ac1PIM1 (56:1) | Plasma of 17 adults with active pulmonary TB disease and 16 adults without active TB | TB diagnosis | Significantly increased in the active TB patients | ( |
| 3D, 7D, 11D-Phytanic acid, behenic acid, threoninyl-γ-glutamate | Serum of 146 patients with lung diseases that were due to non-TB conditions, and 120 patients with clinical signs of TB, 105 healthy | TB diagnosis | Decreased in active TB patients | ( |
| Kynurenine, quinolinic acid, presqualene diphosphate | Significant upregulation in patients with active TB | |||
| 12(R)-HETE, ceramide (d18:1/16:0), cholesterol sulfate, and 4α-formyl-4β-methyl-5α-cholesta-8-en-3β-ol | Plasma of 46 patients with TB, 30 patients with community-acquired pneumonia, 30 controls without active infection | Diagnosis of TB | Significantly higher levels in TB patients than those in CAP patients and controls | ( |
| Glutamate, sulfoxy methionine, and aspartate | Serum of 21 patients with active pulmonary TB, 20 subjects with LTBI, 28 healthy controls | Diagnosis of TB | Higher serum levels of metabolites in active TB patients than in LTBI subjects or healthy controls | ( |
| Glutamine, methionine, and asparagine | Lower serum levels of metabolites in active TB patients than in LTBI subjects or healthy controls | |||
| Cortisol, kynurenine | Blood of GC6-74 healthy, 4462 HIV-negative healthy household contacts of index TB progressors | Predicts TB progression | Higher abundances in the progressor group | ( |
| Glutamine, histidine | Lower abundances in the progressor group | |||
| BK and DABK | Serum of 13 HIV-negative adults with microbiologically confirmed active TB | TB treatment response | Elevated BK and DABK levels after treatment completion | ( |
12(R)-HETE, 12R-hydroxy-5Z,8Z,10E,14Z-eicosatetraenoic acid; Ac1PIM1, acylphosphatidylinositol mannoside; ADA, adenosine deaminase; BK, bradykinin; DABK, DesArg9-bradykinin; CAP, community-acquired pneumonia; GC6-74, the grand challenges in global health GC6-74 project; HIV, human immunodeficiency virus; LAM, lipoarabinomannan; LPI, lysophosphatidylinositol; LTBI, latent tuberculosis infection; MAs, mycolic acids; MPE, malignancy pleural effusion; PG, phosphatidylglycerol; TB, tuberculosis; TPE, tuberculous pleural effusion.