Literature DB >> 33795817

Network pharmacology and molecular docking study on the active ingredients of qidengmingmu capsule for the treatment of diabetic retinopathy.

Mingxu Zhang1, Jiawei Yang1,2, Xiulan Zhao1, Ying Zhao1, Siquan Zhu3,4.   

Abstract

Diabetic retinopathy (DR) is a leading cause of irreversible blindness globally. Qidengmingmu Capsule (QC) is a Chinese patent medicine used to treat DR, but the molecular mechanism of the treatment remains unknown. In this study, we identified and validated potential molecular mechanisms involved in the treatment of DR with QC via network pharmacology and molecular docking methods. The results of Ingredient-DR Target Network showed that 134 common targets and 20 active ingredients of QC were involved. According to the results of enrichment analysis, 2307 biological processes and 40 pathways were related to the treatment effects. Most of these processes and pathways were important for cell survival and were associated with many key factors in DR, such as vascular endothelial growth factor-A (VEGFA), hypoxia-inducible factor-1A (HIF-1Α), and tumor necrosis factor-α (TNFα). Based on the results of the PPI network and KEGG enrichment analyses, we selected AKT1, HIF-1α, VEGFA, TNFα and their corresponding active ingredients for molecular docking. According to the molecular docking results, several key targets of DR (including AKT1, HIF-1α, VEGFA, and TNFα) can form stable bonds with the corresponding active ingredients of QC. In conclusion, through network pharmacology methods, we found that potential biological mechanisms involved in the alleviation of DR by QC are related to multiple biological processes and signaling pathways. The molecular docking results also provide us with sound directions for further experiments.

Entities:  

Year:  2021        PMID: 33795817      PMCID: PMC8016862          DOI: 10.1038/s41598-021-86914-8

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  46 in total

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Authors:  Nidhi Relhan; Harry W Flynn
Journal:  Curr Opin Ophthalmol       Date:  2017-05       Impact factor: 3.761

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Journal:  Comput Biol Chem       Date:  2020-12-03       Impact factor: 2.877

Review 3.  Diabetic retinopathy: hyperglycaemia, oxidative stress and beyond.

Authors:  Hans-Peter Hammes
Journal:  Diabetologia       Date:  2017-09-24       Impact factor: 10.122

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Journal:  J Biochem       Date:  2020-05-01       Impact factor: 3.387

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Journal:  Drug Chem Toxicol       Date:  2018-09-12       Impact factor: 3.356

Review 6.  Perturbed Biochemical Pathways and Associated Oxidative Stress Lead to Vascular Dysfunctions in Diabetic Retinopathy.

Authors:  Nidhi Mahajan; Palkin Arora; Rajat Sandhir
Journal:  Oxid Med Cell Longev       Date:  2019-03-06       Impact factor: 6.543

Review 7.  Diabetes Mellitus/Poststroke Hyperglycemia: a Detrimental Factor for tPA Thrombolytic Stroke Therapy.

Authors:  Yinghua Jiang; Ning Liu; Jinrui Han; Yadan Li; Pierce Spencer; Samuel J Vodovoz; Ming-Ming Ning; Gregory Bix; Prasad V G Katakam; Aaron S Dumont; Xiaoying Wang
Journal:  Transl Stroke Res       Date:  2020-11-02       Impact factor: 6.829

8.  A novel chemometric method for the prediction of human oral bioavailability.

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Journal:  Int J Mol Sci       Date:  2012-06-07       Impact factor: 6.208

9.  Astragalus Polysaccharide Improves Insulin Sensitivity via AMPK Activation in 3T3-L1 Adipocytes.

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Journal:  Molecules       Date:  2018-10-21       Impact factor: 4.411

10.  Baicalein Protects Rats with Diabetic Cardiomyopathy Against Oxidative Stress and Inflammation Injury via Phosphatidylinositol 3-Kinase (PI3K)/AKT Pathway.

Authors:  Lin Ma; Xiang Peng Li; Heng Sheng Ji; Yue Fen Liu; En Ze Li
Journal:  Med Sci Monit       Date:  2018-08-02
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  4 in total

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2.  Molecular Mechanism of Food-Derived Polyphenols on PD-L1 Dimerization: A Molecular Dynamics Simulation Study.

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Journal:  Int J Mol Sci       Date:  2021-10-10       Impact factor: 5.923

3.  Celastrol Alleviates Autoimmune Hepatitis Through the PI3K/AKT Signaling Pathway Based on Network Pharmacology and Experiments.

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Journal:  Front Pharmacol       Date:  2022-03-10       Impact factor: 5.810

4.  Network Pharmacology and Molecular Docking Elucidate the Underlying Pharmacological Mechanisms of the Herb Houttuynia cordata in Treating Pneumonia Caused by SARS-CoV-2.

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Journal:  Viruses       Date:  2022-07-21       Impact factor: 5.818

  4 in total

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