Literature DB >> 33790476

Author Correction: ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis.

Jeffrey M Granja1,2,3, M Ryan Corces4,5,6,7, Sarah E Pierce8,9, S Tansu Bagdatli8, Hani Choudhry10, Howard Y Chang11,12,13, William J Greenleaf14,15,16,17.   

Abstract

Entities:  

Year:  2021        PMID： 33790476      PMCID： PMC8187146          DOI： 10.1038/s41588-021-00850-x

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   41.307


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Correction to: Nature Genetics 10.1038/s41588-021-00790-6, published nline 25 February 2021. This paper was originally published without open access. As of the date of this correction, the paper is available online as an open-access paper under a Creative Commons Attribution 4.0 International License. The Acknowledgements have additionally been updated to specify the funding agency for NCI Cancer Moonshot grant U2CCA233311.
  6 in total

1.  Single-Cell RNA and ATAC Sequencing Reveal Hemodialysis-Related Immune Dysregulation of Circulating Immune Cell Subpopulations.

Authors:  Hongwei Wu; Jingjing Dong; Haiyan Yu; Kang Wang; Weier Dai; Xinzhou Zhang; Nan Hu; Lianghong Yin; Donge Tang; Fanna Liu; Yong Dai
Journal:  Front Immunol       Date:  2022-05-26       Impact factor: 8.786

2.  Single-cell RNA-seq reveals cell type-specific molecular and genetic associations to lupus.

Authors:  Richard K Perez; M Grace Gordon; Meena Subramaniam; Min Cheol Kim; George C Hartoularos; Sasha Targ; Yang Sun; Anton Ogorodnikov; Raymund Bueno; Andrew Lu; Mike Thompson; Nadav Rappoport; Andrew Dahl; Cristina M Lanata; Mehrdad Matloubian; Lenka Maliskova; Serena S Kwek; Tony Li; Michal Slyper; Julia Waldman; Danielle Dionne; Orit Rozenblatt-Rosen; Lawrence Fong; Maria Dall'Era; Brunilda Balliu; Aviv Regev; Jinoos Yazdany; Lindsey A Criswell; Noah Zaitlen; Chun Jimmie Ye
Journal:  Science       Date:  2022-04-08       Impact factor: 63.714

3.  DIRECT-NET: An efficient method to discover cis-regulatory elements and construct regulatory networks from single-cell multiomics data.

Authors:  Lihua Zhang; Jing Zhang; Qing Nie
Journal:  Sci Adv       Date:  2022-06-01       Impact factor: 14.957

4.  Integrative Single-Cell RNA-Seq and ATAC-Seq Analysis of Mesenchymal Stem/Stromal Cells Derived from Human Placenta.

Authors:  Jinlu Li; Quanlei Wang; Yanru An; Xiaoyan Chen; Yanan Xing; Qiuting Deng; Zelong Li; Shengpeng Wang; Xi Dai; Ning Liang; Yong Hou; Huanming Yang; Zhouchun Shang
Journal:  Front Cell Dev Biol       Date:  2022-04-05

5.  Single-cell chromatin profiling of the primitive gut tube reveals regulatory dynamics underlying lineage fate decisions.

Authors:  Ryan J Smith; Hongpan Zhang; Shengen Shawn Hu; Theodora Yung; Roshane Francis; Lilian Lee; Mark W Onaitis; Peter B Dirks; Chongzhi Zang; Tae-Hee Kim
Journal:  Nat Commun       Date:  2022-05-26       Impact factor: 17.694

6.  Integrative Single-Cell RNA-Seq and ATAC-Seq Analysis of Peripheral Mononuclear Cells in Patients With Ankylosing Spondylitis.

Authors:  Huixuan Xu; Haiyan Yu; Lixiong Liu; Hongwei Wu; Cantong Zhang; Wanxia Cai; Xiaoping Hong; Dongzhou Liu; Donge Tang; Yong Dai
Journal:  Front Immunol       Date:  2021-11-22       Impact factor: 7.561
  6 in total

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