Literature DB >> 33784496

Genetic requirements for cell division in a genomically minimal cell.

James F Pelletier1, Lijie Sun2, Kim S Wise2, Nacyra Assad-Garcia2, Bogumil J Karas3, Thomas J Deerinck4, Mark H Ellisman4, Andreas Mershin5, Neil Gershenfeld5, Ray-Yuan Chuang2, John I Glass6, Elizabeth A Strychalski7.   

Abstract

Genomically minimal cells, such as JCVI-syn3.0, offer a platform to clarify genes underlying core physiological processes. Although this minimal cell includes genes essential for population growth, the physiology of its single cells remained uncharacterized. To investigate striking morphological variation in JCVI-syn3.0 cells, we present an approach to characterize cell propagation and determine genes affecting cell morphology. Microfluidic chemostats allowed observation of intrinsic cell dynamics that result in irregular morphologies. A genome with 19 genes not retained in JCVI-syn3.0 generated JCVI-syn3A, which presents morphology similar to that of JCVI-syn1.0. We further identified seven of these 19 genes, including two known cell division genes, ftsZ and sepF, a hydrolase of unknown substrate, and four genes that encode membrane-associated proteins of unknown function, which are required together to restore a phenotype similar to that of JCVI-syn1.0. This result emphasizes the polygenic nature of cell division and morphology in a genomically minimal cell. Published by Elsevier Inc.

Keywords:  L-form, microfluidics; cell division; engineering biology; genes of unknown function; minimal cell; morphology; mycoplasma; synthetic biology; synthetic cell

Year:  2021        PMID: 33784496     DOI: 10.1016/j.cell.2021.03.008

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  9 in total

1.  The Origin of Life: What Is the Question?

Authors:  Christophe Malaterre; Cyrille Jeancolas; Philippe Nghe
Journal:  Astrobiology       Date:  2022-05-20       Impact factor: 4.045

2.  Traditional protocols and optimization methods lead to absent expression in a mycoplasma cell-free gene expression platform.

Authors:  Andrei Sakai; Christopher R Deich; Frank H T Nelissen; Aafke J Jonker; Daniela M de C Bittencourt; Christopher P Kempes; Kim S Wise; Hans A Heus; Wilhelm T S Huck; Katarzyna P Adamala; John I Glass
Journal:  Synth Biol (Oxf)       Date:  2022-05-21

3.  Construction of an Antibiotic-Free Vector and its Application in the Metabolic Engineering of Escherichia Coli for Polyhydroxybutyrate Production.

Authors:  Ying-Cheng Liao; Boonyawee Saengsawang; Jun-Wei Chen; Xiao-Zhen Zhuo; Si-Yu Li
Journal:  Front Bioeng Biotechnol       Date:  2022-06-03

4.  Synthetic Biology: Old and New Dilemmas-The Case of Artificial Life.

Authors:  Nikolaos Kolisis; Fragiskos Kolisis
Journal:  BioTech (Basel)       Date:  2021-07-20

5.  Toward the Complete Functional Characterization of a Minimal Bacterial Proteome.

Authors:  David M Bianchi; James F Pelletier; Clyde A Hutchison; John I Glass; Zaida Luthey-Schulten
Journal:  J Phys Chem B       Date:  2022-09-01       Impact factor: 3.466

6.  Quantification of synthetic errors during chemical synthesis of DNA and its suppression by non-canonical nucleosides.

Authors:  Yoshiaki Masaki; Yukiko Onishi; Kohji Seio
Journal:  Sci Rep       Date:  2022-07-15       Impact factor: 4.996

Review 7.  Towards a synthetic cell cycle.

Authors:  Lorenzo Olivi; Mareike Berger; Ramon N P Creyghton; Nicola De Franceschi; Cees Dekker; Bela M Mulder; Nico J Claassens; Pieter Rein Ten Wolde; John van der Oost
Journal:  Nat Commun       Date:  2021-07-26       Impact factor: 14.919

8.  Genome-scale metabolic modeling reveals key features of a minimal gene set.

Authors:  Jean-Christophe Lachance; Dominick Matteau; Joëlle Brodeur; Colton J Lloyd; Nathan Mih; Zachary A King; Thomas F Knight; Adam M Feist; Jonathan M Monk; Bernhard O Palsson; Pierre-Étienne Jacques; Sébastien Rodrigue
Journal:  Mol Syst Biol       Date:  2021-07       Impact factor: 11.429

9.  Generating Chromosome Geometries in a Minimal Cell From Cryo-Electron Tomograms and Chromosome Conformation Capture Maps.

Authors:  Benjamin R Gilbert; Zane R Thornburg; Vinson Lam; Fatema-Zahra M Rashid; John I Glass; Elizabeth Villa; Remus T Dame; Zaida Luthey-Schulten
Journal:  Front Mol Biosci       Date:  2021-07-22
  9 in total

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