Literature DB >> 3378046

Chemical kinetics of induced gene expression: activation of transcription by noncooperative binding of multiple regulatory molecules.

H Almagor1, K Paigen.   

Abstract

A chemical kinetics model is described for the regulation of gene expression by the progressive binding of regulatory molecules to specific binding sites on DNA. Chemical rate equations are formulated and solved for the accumulation of regulatory molecules on DNA, the change in the level of induced mRNA, and the change in the level of the encoded protein in the activated tissue. Some special cases are examined, including that of an activation threshold created by a requirement for the binding of a minimum number of regulatory molecules prior to gene activation. Experimental data for several hormone-activated genetic systems are analyzed in the frame of the proposed model, and kinetic parameters are predicted. The model accounts for a number of experimental characteristics of hormone-inducible genetic systems, including the existence of a lag in the time course of mRNA accumulation, the sigmoidal curve of induced mRNA kinetics, the effect of hormone on mRNA stabilization, and the induction parameters observed when hormone analogues are used. The model also provides an explanation for the phenotypes of genetic variants with altered inducibility as changes in the molecular kinetic parameters of gene activity.

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Year:  1988        PMID: 3378046     DOI: 10.1021/bi00406a042

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  4 in total

1.  Importance of input perturbations and stochastic gene expression in the reverse engineering of genetic regulatory networks: insights from an identifiability analysis of an in silico network.

Authors:  Daniel E Zak; Gregory E Gonye; James S Schwaber; Francis J Doyle
Journal:  Genome Res       Date:  2003-11       Impact factor: 9.043

2.  The N haplotype of the murine beta-glucuronidase gene is altered in both its systemic regulation and its response to androgen induction.

Authors:  L T Bracey; K Paigen
Journal:  Biochem Genet       Date:  1989-02       Impact factor: 1.890

3.  The Gus-e locus regulates estrogen repression of androgen-induced beta-glucuronidase expression in mouse kidney.

Authors:  G Watson; R Jaussi; D Tabron; K Paigen
Journal:  Biochem Genet       Date:  1993-04       Impact factor: 1.890

4.  Development of lead hammerhead ribozyme candidates against human rod opsin mRNA for retinal degeneration therapy.

Authors:  Heba E Abdelmaksoud; Edwin H Yau; Michael Zuker; Jack M Sullivan
Journal:  Exp Eye Res       Date:  2008-12-06       Impact factor: 3.467

  4 in total

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