Literature DB >> 33778898

Regulatory networking of the three RNA polymerases helps the eukaryotic cells cope with environmental stress.

Purnima Bhargava1.   

Abstract

Environmental stress influences the cellular physiology in multiple ways. Transcription by all the three RNA polymerases (Pols I, II, or III) in eukaryotes is a highly regulated process. With latest advances in technology, which have made many extensive genome-wide studies possible, it is increasingly recognized that all the cellular processes may be interconnected. A comprehensive view of the current research observations brings forward an interesting possibility that Pol II-associated factors may be directly involved in the regulation of expression from the Pol III-transcribed genes and vice versa, thus enabling a cross-talk between the two polymerases. An equally important cross-talk between the Pol I and Pol II/III has also been documented. Collectively, these observations lead to a change in the current perception that looks at the transcription of a set of genes transcribed by the three Pols in isolation. Emergence of an inclusive perspective underscores that all stress signals may converge on common mechanisms of transcription regulation, requiring an extensive cross-talk between the regulatory partners. Of the three RNA polymerases, Pol III turns out as the hub of these cross-talks, an essential component of the cellular stress-response under which the majority of the cellular transcriptional activity is shut down or re-aligned.

Entities:  

Keywords:  Cross-talk; Networking; RNA polymerases; Stress; Transcription

Year:  2021        PMID: 33778898     DOI: 10.1007/s00294-021-01179-y

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  53 in total

1.  Cross talk between tRNA and rRNA synthesis in Saccharomyces cerevisiae.

Authors:  J F Briand; F Navarro; O Gadal; P Thuriaux
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

2.  A multiplicity of factors contributes to selective RNA polymerase III occupancy of a subset of RNA polymerase III genes in mouse liver.

Authors:  Donatella Canella; David Bernasconi; Federica Gilardi; Gwendal LeMartelot; Eugenia Migliavacca; Viviane Praz; Pascal Cousin; Mauro Delorenzi; Nouria Hernandez
Journal:  Genome Res       Date:  2012-01-27       Impact factor: 9.043

3.  Chromatin structure and expression of a gene transcribed by RNA polymerase III are independent of H2A.Z deposition.

Authors:  Aneeshkumar Gopalakrishnan Arimbasseri; Purnima Bhargava
Journal:  Mol Cell Biol       Date:  2008-02-11       Impact factor: 4.272

4.  Interactome of the yeast RNA polymerase III transcription machinery constitutes several chromatin modifiers and regulators of the genes transcribed by RNA polymerase II.

Authors:  Pratibha Bhalla; Dipti Vinayak Vernekar; Benoit Gilquin; Yohann Couté; Purnima Bhargava
Journal:  Gene       Date:  2018-12-26       Impact factor: 3.688

Review 5.  Yeast RNA polymerase III transcription factors and effectors.

Authors:  Joël Acker; Christine Conesa; Olivier Lefebvre
Journal:  Biochim Biophys Acta       Date:  2012-10-12

6.  tRNASec is transcribed by RNA polymerase II in Trypanosoma brucei but not in humans.

Authors:  Eric Aeby; Elisabetta Ullu; Hasmik Yepiskoposyan; Bernd Schimanski; Isabel Roditi; Oliver Mühlemann; André Schneider
Journal:  Nucleic Acids Res       Date:  2010-05-05       Impact factor: 16.971

7.  The Euplotes La motif protein p43 has properties of a telomerase-specific subunit.

Authors:  Stefan Aigner; Jan Postberg; Hans J Lipps; Thomas R Cech
Journal:  Biochemistry       Date:  2003-05-20       Impact factor: 3.162

8.  Pol II and its associated epigenetic marks are present at Pol III-transcribed noncoding RNA genes.

Authors:  Artem Barski; Iouri Chepelev; Dritan Liko; Suresh Cuddapah; Alastair B Fleming; Joanna Birch; Kairong Cui; Robert J White; Keji Zhao
Journal:  Nat Struct Mol Biol       Date:  2010-04-25       Impact factor: 15.369

9.  RNA polymerase III transcriptomes in human embryonic stem cells and induced pluripotent stem cells, and relationships with pluripotency transcription factors.

Authors:  Ravi K Alla; Bradley R Cairns
Journal:  PLoS One       Date:  2014-01-20       Impact factor: 3.240

10.  Yeast PAF1 complex counters the pol III accumulation and replication stress on the tRNA genes.

Authors:  Pratibha Bhalla; Ashutosh Shukla; Dipti Vinayak Vernekar; Aneeshkumar Gopalakrishnan Arimbasseri; Kuljeet Singh Sandhu; Purnima Bhargava
Journal:  Sci Rep       Date:  2019-09-09       Impact factor: 4.379

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  1 in total

1.  A New Insight Into the Underlying Adaptive Strategies of Euryhaline Marine Fish to Low Salinity Environment: Through Cholesterol Nutrition to Regulate Physiological Responses.

Authors:  Yangguang Bao; Yuedong Shen; Xuejiao Li; Zhaoxun Wu; Lefei Jiao; Jing Li; Qicun Zhou; Min Jin
Journal:  Front Nutr       Date:  2022-04-14
  1 in total

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