Literature DB >> 33772211

Development of deep learning algorithms for predicting blastocyst formation and quality by time-lapse monitoring.

Qiuyue Liao1, Qi Zhang2, Xue Feng1, Haibo Huang2, Haohao Xu2, Baoyuan Tian2, Jihao Liu2, Qihui Yu2, Na Guo1, Qun Liu1, Bo Huang1, Ding Ma1, Jihui Ai3, Shugong Xu4, Kezhen Li5.   

Abstract

Approaches to reliably predict the developmental potential of embryos and select suitable embryos for blastocyst culture are needed. The development of time-lapse monitoring (TLM) and artificial intelligence (AI) may help solve this problem. Here, we report deep learning models that can accurately predict blastocyst formation and usable blastocysts using TLM videos of the embryo's first three days. The DenseNet201 network, focal loss, long short-term memory (LSTM) network and gradient boosting classifier were mainly employed, and video preparation algorithms, spatial stream and temporal stream models were developed into ensemble prediction models called STEM and STEM+. STEM exhibited 78.2% accuracy and 0.82 AUC in predicting blastocyst formation, and STEM+ achieved 71.9% accuracy and 0.79 AUC in predicting usable blastocysts. We believe the models are beneficial for blastocyst formation prediction and embryo selection in clinical practice, and our modeling methods will provide valuable information for analyzing medical videos with continuous appearance variation.

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Year:  2021        PMID: 33772211      PMCID: PMC7998018          DOI: 10.1038/s42003-021-01937-1

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  43 in total

1.  Non-invasive imaging of human embryos before embryonic genome activation predicts development to the blastocyst stage.

Authors:  Connie C Wong; Kevin E Loewke; Nancy L Bossert; Barry Behr; Christopher J De Jonge; Thomas M Baer; Renee A Reijo Pera
Journal:  Nat Biotechnol       Date:  2010-10-03       Impact factor: 54.908

2.  Development and Validation of a Deep Learning System for Diabetic Retinopathy and Related Eye Diseases Using Retinal Images From Multiethnic Populations With Diabetes.

Authors:  Daniel Shu Wei Ting; Carol Yim-Lui Cheung; Gilbert Lim; Gavin Siew Wei Tan; Nguyen D Quang; Alfred Gan; Haslina Hamzah; Renata Garcia-Franco; Ian Yew San Yeo; Shu Yen Lee; Edmund Yick Mun Wong; Charumathi Sabanayagam; Mani Baskaran; Farah Ibrahim; Ngiap Chuan Tan; Eric A Finkelstein; Ecosse L Lamoureux; Ian Y Wong; Neil M Bressler; Sobha Sivaprasad; Rohit Varma; Jost B Jonas; Ming Guang He; Ching-Yu Cheng; Gemmy Chui Ming Cheung; Tin Aung; Wynne Hsu; Mong Li Lee; Tien Yin Wong
Journal:  JAMA       Date:  2017-12-12       Impact factor: 56.272

3.  SDAE-GAN: Enable high-dimensional pathological images in liver cancer survival prediction with a policy gradient based data augmentation method.

Authors:  Hejun Wu; Rong Gao; Yeong Poh Sheng; Bo Chen; Shuo Li
Journal:  Med Image Anal       Date:  2020-02-11       Impact factor: 8.545

4.  Live birth rate is significantly higher after blastocyst transfer than after cleavage-stage embryo transfer when at least four embryos are available on day 3 of embryo culture. A randomized prospective study.

Authors:  Evangelos G Papanikolaou; Elke D'haeseleer; Greta Verheyen; Hilde Van de Velde; Michael Camus; Andre Van Steirteghem; Paul Devroey; Herman Tournaye
Journal:  Hum Reprod       Date:  2005-07-29       Impact factor: 6.918

5.  ART in Europe, 2014: results generated from European registries by ESHRE: The European IVF-monitoring Consortium (EIM) for the European Society of Human Reproduction and Embryology (ESHRE).

Authors:  Ch De Geyter; C Calhaz-Jorge; M S Kupka; C Wyns; E Mocanu; T Motrenko; G Scaravelli; J Smeenk; S Vidakovic; V Goossens
Journal:  Hum Reprod       Date:  2018-09-01       Impact factor: 6.918

6.  Intra- and interobserver analysis in the morphological assessment of early stage embryos during an IVF procedure: a multicentre study.

Authors:  Goedele Paternot; Alex M Wetzels; Fabienne Thonon; Anne Vansteenbrugge; Dorien Willemen; Johanna Devroe; Sophie Debrock; Thomas M D'Hooghe; Carl Spiessens
Journal:  Reprod Biol Endocrinol       Date:  2011-09-15       Impact factor: 5.211

7.  Feasibility of deep learning for predicting live birth from a blastocyst image in patients classified by age.

Authors:  Yasunari Miyagi; Toshihiro Habara; Rei Hirata; Nobuyoshi Hayashi
Journal:  Reprod Med Biol       Date:  2019-03-01

8.  Deep learning enables robust assessment and selection of human blastocysts after in vitro fertilization.

Authors:  Zev Rosenwaks; Olivier Elemento; Nikica Zaninovic; Iman Hajirasouliha; Pegah Khosravi; Ehsan Kazemi; Qiansheng Zhan; Jonas E Malmsten; Marco Toschi; Pantelis Zisimopoulos; Alexandros Sigaras; Stuart Lavery; Lee A D Cooper; Cristina Hickman; Marcos Meseguer
Journal:  NPJ Digit Med       Date:  2019-04-04

9.  Automated Video Behavior Recognition of Pigs Using Two-Stream Convolutional Networks.

Authors:  Kaifeng Zhang; Dan Li; Jiayun Huang; Yifei Chen
Journal:  Sensors (Basel)       Date:  2020-02-17       Impact factor: 3.576

10.  Deep Learning vs. Radiomics for Predicting Axillary Lymph Node Metastasis of Breast Cancer Using Ultrasound Images: Don't Forget the Peritumoral Region.

Authors:  Qiuchang Sun; Xiaona Lin; Yuanshen Zhao; Ling Li; Kai Yan; Dong Liang; Desheng Sun; Zhi-Cheng Li
Journal:  Front Oncol       Date:  2020-01-31       Impact factor: 6.244

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  5 in total

Review 1.  Human Oocyte Morphology and Outcomes of Infertility Treatment: a Systematic Review.

Authors:  Dmitry Nikiforov; Marie Louise Grøndahl; Julius Hreinsson; Claus Yding Andersen
Journal:  Reprod Sci       Date:  2021-11-23       Impact factor: 2.924

2.  Medical Professional Enhancement Using Explainable Artificial Intelligence in Fetal Cardiac Ultrasound Screening.

Authors:  Akira Sakai; Masaaki Komatsu; Reina Komatsu; Ryu Matsuoka; Suguru Yasutomi; Ai Dozen; Kanto Shozu; Tatsuya Arakaki; Hidenori Machino; Ken Asada; Syuzo Kaneko; Akihiko Sekizawa; Ryuji Hamamoto
Journal:  Biomedicines       Date:  2022-02-25

3.  Does conventional morphological evaluation still play a role in predicting blastocyst formation?

Authors:  Xiaoming Jiang; Jiali Cai; Lanlan Liu; Zhenfang Liu; Wenjie Wang; Jinhua Chen; Chao Yang; Jie Geng; Caihui Ma; Jianzhi Ren
Journal:  Reprod Biol Endocrinol       Date:  2022-04-19       Impact factor: 4.982

4.  Unique Deep Radiomic Signature Shows NMN Treatment Reverses Morphology of Oocytes from Aged Mice.

Authors:  Abbas Habibalahi; Jared M Campbell; Michael J Bertoldo; Saabah B Mahbub; Dale M Goss; William L Ledger; Robert B Gilchrist; Lindsay E Wu; Ewa M Goldys
Journal:  Biomedicines       Date:  2022-06-29

Review 5.  Reporting on the Value of Artificial Intelligence in Predicting the Optimal Embryo for Transfer: A Systematic Review including Data Synthesis.

Authors:  Konstantinos Sfakianoudis; Evangelos Maziotis; Sokratis Grigoriadis; Agni Pantou; Georgia Kokkini; Anna Trypidi; Polina Giannelou; Athanasios Zikopoulos; Irene Angeli; Terpsithea Vaxevanoglou; Konstantinos Pantos; Mara Simopoulou
Journal:  Biomedicines       Date:  2022-03-17
  5 in total

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