Literature DB >> 33772091

Dynamic bacterial community response to Akashiwo sanguinea (Dinophyceae) bloom in indoor marine microcosms.

Seung Won Jung1, Junsu Kang2,3, Joon Sang Park2, Hyoung Min Joo4, Sung-Suk Suh5, Donhyug Kang6, Taek-Kyun Lee7, Hyun-Jung Kim2.   

Abstract

We investigated the dynamics of the bacterial composition and metabolic function within Akashiwo sanguinea bloom using a 100-L indoor microcosm and metagenomic next-generation sequencing. We found that the bacterial community was classified into three groups at 54% similarity. Group I was associated with "during the A. sanguinea bloom stage" and mainly consisted of Alphaproteobacteria, Flavobacteriia and Gammaproteobacteria. Meanwhile, groups II and III were associated with the "late bloom/decline stage to post-bloom stage" with decreased Flavobacteriia and Gammaproteobacteria in these stages. Upon the termination of the A. sanguinea bloom, the concentrations of inorganic nutrients (particularly PO43-, NH4+ and dissolved organic carbon) increased rapidly and then decreased. From the network analysis, we found that the A. sanguinea node is associated with certain bacteria. After the bloom, the specific increases in NH4+ and PO43- nodes are associated with other bacterial taxa. The changes in the functional groups of the bacterial community from chemoheterotrophy to nitrogen association metabolisms were consistent with the environmental impacts during and after A. sanguinea bloom. Consequently, certain bacterial communities and the environments dynamically changed during and after harmful algal blooms and a rapid turnover within the bacterial community and their function can respond to ecological interactions.

Entities:  

Year:  2021        PMID: 33772091      PMCID: PMC7997919          DOI: 10.1038/s41598-021-86590-8

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  43 in total

1.  Cytoscape: a software environment for integrated models of biomolecular interaction networks.

Authors:  Paul Shannon; Andrew Markiel; Owen Ozier; Nitin S Baliga; Jonathan T Wang; Daniel Ramage; Nada Amin; Benno Schwikowski; Trey Ideker
Journal:  Genome Res       Date:  2003-11       Impact factor: 9.043

2.  Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists.

Authors:  Cheryl-Emiliane T Chow; Diane Y Kim; Rohan Sachdeva; David A Caron; Jed A Fuhrman
Journal:  ISME J       Date:  2013-11-07       Impact factor: 10.302

3.  Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities.

Authors:  Patrick D Schloss; Sarah L Westcott; Thomas Ryabin; Justine R Hall; Martin Hartmann; Emily B Hollister; Ryan A Lesniewski; Brian B Oakley; Donovan H Parks; Courtney J Robinson; Jason W Sahl; Blaz Stres; Gerhard G Thallinger; David J Van Horn; Carolyn F Weber
Journal:  Appl Environ Microbiol       Date:  2009-10-02       Impact factor: 4.792

4.  Ecological dynamics and co-occurrence among marine phytoplankton, bacteria and myoviruses shows microdiversity matters.

Authors:  David M Needham; Rohan Sachdeva; Jed A Fuhrman
Journal:  ISME J       Date:  2017-04-11       Impact factor: 10.302

5.  Profiles of quorum sensing (QS)-related sequences in phycospheric microorganisms during a marine dinoflagellate bloom, as determined by a metagenomic approach.

Authors:  Xinqing Huang; Jianming Zhu; Zhonghua Cai; Yongmin Lao; Hui Jin; Ke Yu; Boya Zhang; Jin Zhou
Journal:  Microbiol Res       Date:  2018-08-30       Impact factor: 5.415

6.  Short-term dynamics and interactions of marine protist communities during the spring-summer transition.

Authors:  Lyria Berdjeb; Alma Parada; David M Needham; Jed A Fuhrman
Journal:  ISME J       Date:  2018-03-29       Impact factor: 10.302

7.  An association network analysis among microeukaryotes and bacterioplankton reveals algal bloom dynamics.

Authors:  Shangjin Tan; Jin Zhou; Xiaoshan Zhu; Shichen Yu; Wugen Zhan; Bo Wang; Zhonghua Cai
Journal:  J Phycol       Date:  2015-01-09       Impact factor: 2.923

8.  Photolithotrophy, photoheterotrophy and chemoheterotrophy during spring phytoplankton development (Lake Pavin).

Authors:  C Amblard; S Rachiq; G Bourdier
Journal:  Microb Ecol       Date:  1992-09       Impact factor: 4.552

9.  A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom.

Authors:  Caiyun Yang; Yi Li; Yanyan Zhou; Xueqian Lei; Wei Zheng; Yun Tian; Joy D Van Nostrand; Zhili He; Liyou Wu; Jizhong Zhou; Tianling Zheng
Journal:  Sci Rep       Date:  2016-10-05       Impact factor: 4.379

10.  Comparative molecular microbial ecology of the spring haptophyte bloom in a greenland arctic oligosaline lake.

Authors:  Susanna Theroux; Yongsong Huang; Linda Amaral-Zettler
Journal:  Front Microbiol       Date:  2012-12-17       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.