Literature DB >> 33771472

Stationary Ca2+ nanodomains in the presence of buffers with two binding sites.

Yinbo Chen1, Victor Matveev2.   

Abstract

We examine closed-form approximations for the equilibrium Ca2+ and buffer concentrations near a point Ca2+ source representing a Ca2+ channel, in the presence of a mobile buffer with two Ca2+ binding sites activated sequentially and possessing distinct binding affinities and kinetics. This allows us to model the impact on Ca2+ nanodomains of realistic endogenous Ca2+ buffers characterized by cooperative Ca2+ binding, such as calretinin. The approximations we present involve a combination or rational and exponential functions, whose parameters are constrained using the series interpolation method that we recently introduced for the case of simpler Ca2+ buffers with a single Ca2+ binding site. We conduct extensive parameter sensitivity analysis and show that the obtained closed-form approximations achieve reasonable qualitative accuracy for a wide range of buffer's Ca2+ binding properties and other relevant model parameters. In particular, the accuracy of the derived approximants exceeds that of the rapid buffering approximation in large portions of the relevant parameter space.
Copyright © 2021 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2021        PMID: 33771472      PMCID: PMC8204396          DOI: 10.1016/j.bpj.2021.03.015

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  59 in total

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Authors:  M D Stern
Journal:  Cell Calcium       Date:  1992-03       Impact factor: 6.817

2.  Modeling study of the effects of overlapping Ca2+ microdomains on neurotransmitter release.

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Journal:  Biophys J       Date:  1999-02       Impact factor: 4.033

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Journal:  J Neurosci       Date:  1997-09-15       Impact factor: 6.167

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Authors:  Peter V Gordon; Cyrill B Muratov; Stanislav Y Shvartsman
Journal:  J Chem Phys       Date:  2013-03-14       Impact factor: 3.488

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Authors:  W M Roberts
Journal:  Nature       Date:  1993-05-06       Impact factor: 49.962

Review 6.  Calcium cooperativity of exocytosis as a measure of Ca²+ channel domain overlap.

Authors:  Victor Matveev; Richard Bertram; Arthur Sherman
Journal:  Brain Res       Date:  2011-05-12       Impact factor: 3.252

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Authors:  P C Pape; D S Jong; W K Chandler
Journal:  J Gen Physiol       Date:  1995-08       Impact factor: 4.086

8.  Calmodulin as a direct detector of Ca2+ signals.

Authors:  Guido C Faas; Sridhar Raghavachari; John E Lisman; Istvan Mody
Journal:  Nat Neurosci       Date:  2011-01-23       Impact factor: 24.884

Review 9.  Presynaptic nanodomains: a tale of two synapses.

Authors:  Lu-Yang Wang; George J Augustine
Journal:  Front Cell Neurosci       Date:  2015-01-26       Impact factor: 5.505

10.  Explicit Theoretical Analysis of How the Rate of Exocytosis Depends on Local Control by Ca2+ Channels.

Authors:  Francesco Montefusco; Morten Gram Pedersen
Journal:  Comput Math Methods Med       Date:  2018-11-14       Impact factor: 2.238

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