Literature DB >> 33769251

Detection of SARS-CoV-2 lineage P.1 in patients from a region with exponentially increasing hospitalisation rate, February 2021, Rio Grande do Sul, Southern Brazil.

Andreza Francisco Martins1,2,3,4, Alexandre Prehn Zavascki1,4,5,6, Priscila Lamb Wink1,2,7, Fabiana Caroline Zempulski Volpato1,7,8, Francielle Liz Monteiro1,7, Clévia Rosset7,9, Fernanda De-Paris1,7, Álvaro Krüger Ramos10, Afonso Luís Barth1,2,7,8.   

Abstract

The emergence of SARS-CoV-2 P.1 lineage coincided with a surge in hospitalisations in the North region of Brazil. In the South region's Rio Grande do Sul state, severe COVID-19 case numbers rose 3.8 fold in February 2021. During that month, at a COVID-19 referral hospital in this state, whole-genome sequencing of a subset of cases' specimens (n = 27) revealed P.1 lineage SARS-CoV-2 in most (n = 24). Findings raise concerns regarding a possible association between lineage P.1 and rapid case and hospitalisation increases.

Entities:  

Keywords:  COVID-19; P.1 lineage; SARS-CoV-2

Mesh：

Year:  2021        PMID： 33769251      PMCID： PMC7995561          DOI： 10.2807/1560-7917.ES.2021.26.12.2100276

Source DB:  PubMed          Journal:  Euro Surveill        ISSN： 1025-496X


  1 in total

1.  Genomic characterization of a novel SARS-CoV-2 lineage from Rio de Janeiro, Brazil.

Authors:  Carolina M Voloch; Ronaldo da Silva Francisco; Luiz G P de Almeida; Cynthia C Cardoso; Otavio J Brustolini; Alexandra L Gerber; Ana Paula de C Guimarães; Diana Mariani; Raissa Mirella da Costa; Orlando C Ferreira; Thiago Silva Frauches; Claudia Maria Braga de Mello; Isabela de Carvalho Leitão; Rafael Mello Galliez; Débora Souza Faffe; Terezinha M P P Castiñeiras; Amilcar Tanuri; Ana Tereza R de Vasconcelos
Journal:  J Virol       Date:  2021-03-01       Impact factor: 5.103
  1 in total
  17 in total

1.  Genomic Surveillance of SARS-CoV-2 Lineages Indicates Early Circulation of P.1 (Gamma) Variant of Concern in Southern Brazil.

Authors:  Priscila Lamb Wink; Rafaela Ramalho; Francielle Liz Monteiro; Fabiana Caroline Zempulski Volpato; Julia Biz Willig; Otávio von Ameln Lovison; Alexandre Prehn Zavascki; Afonso Luís Barth; Andreza Francisco Martins
Journal:  Microbiol Spectr       Date:  2022-02-16

2.  The Impact of the Highly Virulent SARS-CoV-2 Gamma Variant on Young Adults in the State of São Paulo: Was It Inevitable?

Authors:  Beny Spira
Journal:  Cureus       Date:  2022-07-01

3.  SARS-CoV-2 antibody dynamics in blood donors and COVID-19 epidemiology in eight Brazilian state capitals: A serial cross-sectional study.

Authors:  Carlos A Prete; Lewis F Buss; Charles Whittaker; Tassila Salomon; Marcio K Oikawa; Rafael H M Pereira; Isabel C G Moura; Lucas Delerino; Manoel Barral-Netto; Natalia M Tavares; Rafael F O Franca; Viviane S Boaventura; Fabio Miyajima; Alfredo Mendrone-Junior; Cesar de Almeida-Neto; Nanci A Salles; Suzete C Ferreira; Karine A Fladzinski; Luana M de Souza; Luciane K Schier; Patricia M Inoue; Lilyane A Xabregas; Myuki A E Crispim; Nelson Fraiji; Fernando L V Araujo; Luciana M B Carlos; Veridiana Pessoa; Maisa A Ribeiro; Rosenvaldo E de Souza; Sônia M N da Silva; Anna F Cavalcante; Maria I B Valença; Maria V da Silva; Esther Lopes; Luiz A Filho; Sheila O G Mateos; Gabrielle T Nunes; Alexander L Silva-Junior; Michael P Busch; Marcia C Castro; Christopher Dye; Oliver Ratmann; Nuno R Faria; Vítor H Nascimento; Ester C Sabino
Journal:  Elife       Date:  2022-09-22       Impact factor: 8.713

4.  Excess maternal mortality in Brazil: Regional inequalities and trajectories during the COVID-19 epidemic.

Authors:  Jesem Orellana; Nadège Jacques; Daniel Gray Paschoal Leventhal; Lihsieh Marrero; Lina Sofía Morón-Duarte
Journal:  PLoS One       Date:  2022-10-20       Impact factor: 3.752

5. 

Authors:  Janaína Sallas; Guilherme Almeida Elidio; Daniela Buosi Rohlfs; Arnaldo Correia de Medeiros; Dirce Bellezi Guilhem
Journal:  Rev Panam Salud Publica       Date:  2021-05-26

6.  Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil.

Authors:  Nuno R Faria; Thomas A Mellan; Charles Whittaker; Ingra M Claro; Darlan da S Candido; Swapnil Mishra; Oliver G Pybus; Seth Flaxman; Samir Bhatt; Ester C Sabino; Myuki A E Crispim; Flavia C S Sales; Iwona Hawryluk; John T McCrone; Ruben J G Hulswit; Lucas A M Franco; Mariana S Ramundo; Jaqueline G de Jesus; Pamela S Andrade; Thais M Coletti; Giulia M Ferreira; Camila A M Silva; Erika R Manuli; Rafael H M Pereira; Pedro S Peixoto; Moritz U G Kraemer; Nelson Gaburo; Cecilia da C Camilo; Henrique Hoeltgebaum; William M Souza; Esmenia C Rocha; Leandro M de Souza; Mariana C de Pinho; Leonardo J T Araujo; Frederico S V Malta; Aline B de Lima; Joice do P Silva; Danielle A G Zauli; Alessandro C de S Ferreira; Ricardo P Schnekenberg; Daniel J Laydon; Patrick G T Walker; Hannah M Schlüter; Ana L P Dos Santos; Maria S Vidal; Valentina S Del Caro; Rosinaldo M F Filho; Helem M Dos Santos; Renato S Aguiar; José L Proença-Modena; Bruce Nelson; James A Hay; Mélodie Monod; Xenia Miscouridou; Helen Coupland; Raphael Sonabend; Michaela Vollmer; Axel Gandy; Carlos A Prete; Vitor H Nascimento; Marc A Suchard; Thomas A Bowden; Sergei L K Pond; Chieh-Hsi Wu; Oliver Ratmann; Neil M Ferguson; Christopher Dye; Nick J Loman; Philippe Lemey; Andrew Rambaut; Nelson A Fraiji; Maria do P S S Carvalho
Journal:  Science       Date:  2021-04-14       Impact factor: 47.728

7.  Purinergic signaling elements are correlated with coagulation players in peripheral blood and leukocyte samples from COVID-19 patients.

Authors:  Iago C Schultz; Ana Paula S Bertoni; Márcia R Wink
Journal:  J Mol Med (Berl)       Date:  2022-01-29       Impact factor: 4.599

8.  Report 46: Factors driving extensive spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals.

Authors:  Andrea Brizzi; Charles Whittaker; Luciana M S Servo; Iwona Hawryluk; Carlos A Prete; William M de Souza; Renato S Aguiar; Leonardo J T Araujo; Leonardo S Bastos; Alexandra Blenkinsop; Lewis F Buss; Darlan Candido; Marcia C Castro; Silvia F Costa; Julio Croda; Andreza Aruska de Souza Santos; Christopher Dye; Seth Flaxman; Paula L C Fonseca; Victor E V Geddes; Bernardo Gutierrez; Philippe Lemey; Anna S Levin; Thomas Mellan; Diego M Bonfim; Xenia Miscouridou; Swapnil Mishra; Mélodie Monod; Filipe R R Moreira; Bruce Nelson; Rafael H M Pereira; Otavio Ranzani; Ricardo P Schnekenberg; Elizaveta Semenova; Raphael Sonnabend; Renan P Souza; Xiaoyue Xi; Ester C Sabino; Nuno R Faria; Samir Bhatt; Oliver Ratmann
Journal:  medRxiv       Date:  2021-11-02

9.  Nucleocapsid mutations R203K/G204R increase the infectivity, fitness, and virulence of SARS-CoV-2.

Authors:  Haibo Wu; Na Xing; Kaiwen Meng; Beibei Fu; Weiwei Xue; Pan Dong; Wanyan Tang; Yang Xiao; Gexin Liu; Haitao Luo; Wenzhuang Zhu; Xiaoyuan Lin; Geng Meng; Zhenglin Zhu
Journal:  Cell Host Microbe       Date:  2021-11-13       Impact factor: 21.023

10.  SARS-CoV-2 R.1 lineage variants that prevailed in Tokyo in March 2021.

Authors:  Katsutoshi Nagano; Chihiro Tani-Sassa; Yumi Iwasaki; Yuna Takatsuki; Sonoka Yuasa; Yuta Takahashi; Jun Nakajima; Kazunari Sonobe; Naoya Ichimura; Yoko Nukui; Hiroaki Takeuchi; Kousuke Tanimoto; Yukie Tanaka; Akinori Kimura; Shuji Tohda
Journal:  J Med Virol       Date:  2021-08-05       Impact factor: 20.693
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.