Literature DB >> 33767241

Genome-wide characterization and analysis of bHLH transcription factors related to anthocyanin biosynthesis in spine grapes (Vitis davidii).

Ming Li1, Lei Sun1, Hong Gu1, Dawei Cheng1, XiZhi Guo1, Rui Chen2, Zhiyong Wu1, Jianfu Jiang1, Xiucai Fan1, Jinyong Chen3.   

Abstract

As one of the largest transcription factor family, basic helix-loop-helix (bHLH) transcription factor family plays an important role in plant metabolism, physiology and growth. Berry color is one of the important factors that determine grape quality. However, the bHLH transcription factor family's function in anthocyanin synthesis of grape berry has not been studied systematically. We identified 115 bHLH transcription factors in grape genome and phylogenetic analysis indicated that bHLH family could be classified into 25 subfamilies. First, we screened six candidate genes by bioinformatics analysis and expression analysis. We found one of the candidate genes VdbHLH037 belonged to III (f) subfamily and interacted with genes related to anthocyanin synthesis through phylogenetic analysis and interaction network prediction. Therefore, we speculated that VdbHLH037 participated in the anthocyanin synthesis process. To confirm this, we transiently expressed VdbHLH037 in grape and Arabidopsis transformation. Compared with the control, transgenic materials can accumulate more anthocyanins. These results provide a good base to study the function of the VdbHLH family in anthocyanin synthesis of grape berry.

Entities:  

Year:  2021        PMID: 33767241     DOI: 10.1038/s41598-021-85754-w

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  45 in total

1.  Myb-related genes of the Kyoho grape ( Vitis labruscana) regulate anthocyanin biosynthesis.

Authors:  S Kobayashi; M Ishimaru; K Hiraoka; C Honda
Journal:  Planta       Date:  2002-07-16       Impact factor: 4.116

2.  The Arabidopsis basic/helix-loop-helix transcription factor family.

Authors:  Gabriela Toledo-Ortiz; Enamul Huq; Peter H Quail
Journal:  Plant Cell       Date:  2003-08       Impact factor: 11.277

3.  Retrotransposon-induced mutations in grape skin color.

Authors:  Shozo Kobayashi; Nami Goto-Yamamoto; Hirohiko Hirochika
Journal:  Science       Date:  2004-05-14       Impact factor: 47.728

Review 4.  Evolutionary and comparative analysis of MYB and bHLH plant transcription factors.

Authors:  Antje Feller; Katja Machemer; Edward L Braun; Erich Grotewold
Journal:  Plant J       Date:  2011-04       Impact factor: 6.417

5.  Expression of a grape (Vitis vinifera) bZIP transcription factor, VlbZIP36, in Arabidopsis thaliana confers tolerance of drought stress during seed germination and seedling establishment.

Authors:  Mingxing Tu; Xianhang Wang; Tongying Feng; Xiaomeng Sun; Yaqiong Wang; Li Huang; Min Gao; Yuejin Wang; Xiping Wang
Journal:  Plant Sci       Date:  2016-08-17       Impact factor: 4.729

Review 6.  MYB transcription factors that colour our fruit.

Authors:  Andrew C Allan; Roger P Hellens; William A Laing
Journal:  Trends Plant Sci       Date:  2008-02-14       Impact factor: 18.313

7.  Modulation of flavonoid biosynthetic pathway genes and anthocyanins due to virus infection in grapevine (Vitis vinifera L.) leaves.

Authors:  Linga R Gutha; Luis F Casassa; James F Harbertson; Rayapati A Naidu
Journal:  BMC Plant Biol       Date:  2010-08-23       Impact factor: 4.215

8.  Water deficits accelerate ripening and induce changes in gene expression regulating flavonoid biosynthesis in grape berries.

Authors:  Simone D Castellarin; Mark A Matthews; Gabriele Di Gaspero; Gregory A Gambetta
Journal:  Planta       Date:  2007-08-11       Impact factor: 4.116

9.  New member of the R2R3-MYB transcription factors family in grapevine suppresses the anthocyanin accumulation in the flowers of transgenic tobacco.

Authors:  J Ricardo Pérez-Díaz; Jorge Pérez-Díaz; José Madrid-Espinoza; Enrique González-Villanueva; Yerko Moreno; Simón Ruiz-Lara
Journal:  Plant Mol Biol       Date:  2015-10-26       Impact factor: 4.076

10.  The regulatory c1 locus of Zea mays encodes a protein with homology to myb proto-oncogene products and with structural similarities to transcriptional activators.

Authors:  J Paz-Ares; D Ghosal; U Wienand; P A Peterson; H Saedler
Journal:  EMBO J       Date:  1987-12-01       Impact factor: 11.598

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  5 in total

1.  Systematic Analysis of bHLH Transcription Factors in Cassava Uncovers Their Roles in Postharvest Physiological Deterioration and Cyanogenic Glycosides Biosynthesis.

Authors:  Feifei An; Xinhui Xiao; Ting Chen; Jingjing Xue; Xiuqin Luo; Wenjun Ou; Kaimian Li; Jie Cai; Songbi Chen
Journal:  Front Plant Sci       Date:  2022-06-16       Impact factor: 6.627

2.  Transcriptome Analysis Reveals Roles of Anthocyanin- and Jasmonic Acid-Biosynthetic Pathways in Rapeseed in Response to High Light Stress.

Authors:  Yuxiu Luo; Shoulian Teng; Hengxia Yin; Shengping Zhang; Xiaoyun Tuo; Lam-Son Phan Tran
Journal:  Int J Mol Sci       Date:  2021-12-01       Impact factor: 5.923

3.  Genome-wide identification and characterization of PdbHLH transcription factors related to anthocyanin biosynthesis in colored-leaf poplar (Populus deltoids).

Authors:  Xiao-Jing Wang; Xu-Qian Peng; Xiao-Chun Shu; Yu-Hang Li; Zhong Wang; Wei-Bing Zhuang
Journal:  BMC Genomics       Date:  2022-03-28       Impact factor: 3.969

4.  Genome-wide identification and characterization of the bHLH gene family and analysis of their potential relevance to chlorophyll metabolism in Raphanus sativus L.

Authors:  Ruihua Wang; Yuanyuan Li; Minggang Gao; Min Han; Huilian Liu
Journal:  BMC Genomics       Date:  2022-08-01       Impact factor: 4.547

5.  Identification, Characterization and Expression Analysis of Anthocyanin Biosynthesis-related bHLH Genes in Blueberry (Vaccinium corymbosum L.).

Authors:  Yongyan Zhang; Fan Liu; Bin Wang; Huan Wu; Junwei Wu; Jiapeng Liu; Yueting Sun; Chunzhen Cheng; Dongliang Qiu
Journal:  Int J Mol Sci       Date:  2021-12-10       Impact factor: 5.923

  5 in total

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