Literature DB >> 33767201

An updated map of Trypanosoma cruzi histone post-translational modifications.

Rafael Fogaça de Almeida1, Matheus Fernandes1, Lyris Martins Franco de Godoy2.   

Abstract

In humans and other eukaryotes, histone post-translational modifications (hPTMs) play an essential role in the epigenetic control of gene expression. In trypanosomatid parasites, conversely, gene regulation occurs mainly at the post-transcriptional level. However, our group has recently shown that hPTMs are abundant and varied in Trypanosoma cruzi, the etiological agent of Chagas Disease, signaling for possible conserved epigenetic functions. Here, we applied an optimized mass spectrometry-based proteomic workflow to provide a high-confidence comprehensive map of hPTMs, distributed in all canonical, variant and linker histones of T. cruzi. Our work expands the number of known T. cruzi hPTMs by almost 2-fold, representing the largest dataset of hPTMs available to any trypanosomatid to date, and can be used as a basis for functional studies on the dynamic regulation of chromatin by epigenetic mechanisms and the selection of candidates for the development of epigenetic drugs against trypanosomatids.

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Year:  2021        PMID: 33767201      PMCID: PMC7994815          DOI: 10.1038/s41597-021-00818-w

Source DB:  PubMed          Journal:  Sci Data        ISSN: 2052-4463            Impact factor:   6.444


  38 in total

1.  PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry.

Authors:  Bin Ma; Kaizhong Zhang; Christopher Hendrie; Chengzhi Liang; Ming Li; Amanda Doherty-Kirby; Gilles Lajoie
Journal:  Rapid Commun Mass Spectrom       Date:  2003       Impact factor: 2.419

Review 2.  Epigenetic protein families: a new frontier for drug discovery.

Authors:  Cheryl H Arrowsmith; Chas Bountra; Paul V Fish; Kevin Lee; Matthieu Schapira
Journal:  Nat Rev Drug Discov       Date:  2012-04-13       Impact factor: 84.694

3.  Improved peptide identification by targeted fragmentation using CID, HCD and ETD on an LTQ-Orbitrap Velos.

Authors:  Christian K Frese; A F Maarten Altelaar; Marco L Hennrich; Dirk Nolting; Martin Zeller; Jens Griep-Raming; Albert J R Heck; Shabaz Mohammed
Journal:  J Proteome Res       Date:  2011-04-01       Impact factor: 4.466

4.  Chromatin Proteomics Reveals Variable Histone Modifications during the Life Cycle of Trypanosoma cruzi.

Authors:  Teresa Cristina Leandro de Jesus; Vinícius Santana Nunes; Mariana de Camargo Lopes; Daiana Evelin Martil; Leo Kei Iwai; Nilmar Silvio Moretti; Fabrício Castro Machado; Mariana L de Lima-Stein; Otavio Henrique Thiemann; Maria Carolina Elias; Christian Janzen; Sergio Schenkman; Julia Pinheiro Chagas da Cunha
Journal:  J Proteome Res       Date:  2016-05-11       Impact factor: 4.466

5.  Quantitative phosphoproteome and proteome analyses emphasize the influence of phosphorylation events during the nutritional stress of Trypanosoma cruzi: the initial moments of in vitro metacyclogenesis.

Authors:  Aline Castro Rodrigues Lucena; Juliana Carolina Amorim; Carla Vanessa de Paula Lima; Michel Batista; Marco Aurelio Krieger; Lyris Martins Franco de Godoy; Fabricio Klerynton Marchini
Journal:  Cell Stress Chaperones       Date:  2019-07-31       Impact factor: 3.667

6.  Post-translational modifications of Trypanosoma cruzi histone H4.

Authors:  Julia Pinheiro Chagas da Cunha; Ernesto Satoshi Nakayasu; Igor Correia de Almeida; Sergio Schenkman
Journal:  Mol Biochem Parasitol       Date:  2006-09-18       Impact factor: 1.759

7.  Selective di- or trimethylation of histone H3 lysine 76 by two DOT1 homologs is important for cell cycle regulation in Trypanosoma brucei.

Authors:  Christian J Janzen; Sandra B Hake; Joanna E Lowell; George A M Cross
Journal:  Mol Cell       Date:  2006-08       Impact factor: 17.970

8.  Distinct acetylation of Trypanosoma cruzi histone H4 during cell cycle, parasite differentiation, and after DNA damage.

Authors:  Sheila Cristina Nardelli; Julia Pinheiro Chagas da Cunha; Maria Cristina M Motta; Sergio Schenkman
Journal:  Chromosoma       Date:  2009-04-25       Impact factor: 4.316

9.  Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei.

Authors:  T Nicolai Siegel; Doeke R Hekstra; Louise E Kemp; Luisa M Figueiredo; Joanna E Lowell; David Fenyo; Xuning Wang; Scott Dewell; George A M Cross
Journal:  Genes Dev       Date:  2009-04-15       Impact factor: 11.361

10.  Quantitative proteome and phosphoproteome analyses highlight the adherent population during Trypanosoma cruzi metacyclogenesis.

Authors:  Juliana C Amorim; Michel Batista; Elizabeth S da Cunha; Aline C R Lucena; Carla V de Paula Lima; Karla Sousa; Marco A Krieger; Fabricio K Marchini
Journal:  Sci Rep       Date:  2017-08-29       Impact factor: 4.379

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  1 in total

Review 1.  "Reading" a new chapter in protozoan parasite transcriptional regulation.

Authors:  Krista Fleck; Malorie Nitz; Victoria Jeffers
Journal:  PLoS Pathog       Date:  2021-12-02       Impact factor: 6.823

  1 in total

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