Literature DB >> 33760841

The molecular phylogeny of Chionaster nivalis reveals a novel order of psychrophilic and globally distributed Tremellomycetes (Fungi, Basidiomycota).

Nicholas A T Irwin1,2, Chantelle S Twynstra1, Varsha Mathur1, Patrick J Keeling1.   

Abstract

Snow and ice present challenging substrates for cellular growth, yet microbial snow communities not only exist, but are diverse and ecologically impactful. These communities are dominated by green algae, but additional organisms, such as fungi, are also abundant and may be important for nutrient cycling, syntrophic interactions, and community structure in general. However, little is known about these non-algal community members, including their taxonomic affiliations. An example of this is Chionaster nivalis, a unicellular fungus that is morphologically enigmatic and frequently observed in snow communities globally. Despite being described over one hundred years ago, the phylogeny and higher-level taxonomic classifications of C. nivalis remain unknown. Here, we isolated and sequenced the internal transcribed spacer (ITS) and the D1-D2 region of the large subunit ribosomal RNA gene of C. nivalis, providing a molecular barcode for future studies. Phylogenetic analyses using the ITS and D1-D2 region revealed that C. nivalis is part of a novel lineage in the class Tremellomycetes (Basidiomycota, Agaricomycotina) for which a new order Chionasterales ord. nov. (MB838717) and family Chionasteraceae fam. nov. (MB838718) are proposed. Comparisons between C. nivalis and sequences generated from environmental surveys revealed that the Chionasterales are globally distributed and probably psychrophilic, as they appear to be limited to the high alpine and arctic regions. These results highlight the unexplored diversity that exists within these extreme habitats and emphasize the utility of single-cell approaches in characterizing these complex algal-dominated communities.

Entities:  

Year:  2021        PMID: 33760841      PMCID: PMC7990227          DOI: 10.1371/journal.pone.0247594

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  33 in total

Review 1.  Microbial ecology of the cryosphere: sea ice and glacial habitats.

Authors:  Antje Boetius; Alexandre M Anesio; Jody W Deming; Jill A Mikucki; Josephine Z Rapp
Journal:  Nat Rev Microbiol       Date:  2015-09-07       Impact factor: 60.633

2.  Influence of conidial traits and leaf structure on attachment success of aquatic hyphomycetes on leaf litter.

Authors:  Christian K Dang; Mark O Gessner; Eric Chauvet
Journal:  Mycologia       Date:  2007 Jan-Feb       Impact factor: 2.696

3.  Microbial Ecology of Snow Reveals Taxa-Specific Biogeographical Structure.

Authors:  Shawn P Brown; Ari Jumpponen
Journal:  Microb Ecol       Date:  2019-03-13       Impact factor: 4.552

4.  Rapid characterization of aquatic hyphomycetes by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  Julien Cornut; Sophie De Respinis; Mauro Tonolla; Orlando Petrini; Felix Bärlocher; Eric Chauvet; Andreas Bruder
Journal:  Mycologia       Date:  2019-01-14       Impact factor: 2.696

5.  Long-read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments.

Authors:  Felix Heeger; Elizabeth C Bourne; Christiane Baschien; Andrey Yurkov; Boyke Bunk; Cathrin Spröer; Jörg Overmann; Camila J Mazzoni; Michael T Monaghan
Journal:  Mol Ecol Resour       Date:  2018-09-23       Impact factor: 7.090

6.  Estimation of evolutionary distances between nucleotide sequences.

Authors:  A Zharkikh
Journal:  J Mol Evol       Date:  1994-09       Impact factor: 2.395

7.  Primary productivity of snow algae communities on stratovolcanoes of the Pacific Northwest.

Authors:  T L Hamilton; J Havig
Journal:  Geobiology       Date:  2016-12-05       Impact factor: 4.407

8.  ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models.

Authors:  Diego Darriba; David Posada; Alexey M Kozlov; Alexandros Stamatakis; Benoit Morel; Tomas Flouri
Journal:  Mol Biol Evol       Date:  2020-01-01       Impact factor: 16.240

Review 9.  Snow and Glacial Algae: A Review1.

Authors:  Ronald W Hoham; Daniel Remias
Journal:  J Phycol       Date:  2020-02-29       Impact factor: 2.923

10.  Snow algae communities in Antarctica: metabolic and taxonomic composition.

Authors:  Matthew P Davey; Louisa Norman; Peter Sterk; Maria Huete-Ortega; Freddy Bunbury; Bradford Kin Wai Loh; Sian Stockton; Lloyd S Peck; Peter Convey; Kevin K Newsham; Alison G Smith
Journal:  New Phytol       Date:  2019-02-27       Impact factor: 10.151

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